RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 SCTRP47872 440 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 SLC12A2P55011 1212 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 REEP5Q00765 189 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 RGS1Q08116 209 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 ELOAQ14241 798 aaKnown RBP9.78□□□□□ -0.84
RBM39-236ENST00000490484 HERC3Q15034 1050 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 TSNQ15631 228 aaKnown RBP9.78□□□□□ -0.84
RBM39-236ENST00000490484 DEFB134Q4QY38 66 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 TMEM205Q6UW68 189 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 SYT10Q6XYQ8 523 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 RIPOR1Q6ZS17 1223 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 MAATS1Q7Z4T9 603 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 ADAMTSL2Q86TH1 951 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 CTAGE6Q86UF2 777 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 THOC6Q86W42 341 aaKnown RBP9.78□□□□□ -0.84
RBM39-236ENST00000490484 CATSPER1Q8NEC5 780 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 OR4K1Q8NGD4 311 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 PSMF1Q92530 271 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 CDKL2Q92772 493 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 PEX11GQ96HA9 241 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 MAGEB10Q96LZ2 347 aaPredicted RBP9.78□□□□□ -0.84
RBM39-236ENST00000490484 PSMG3-AS1Q96PY0 264 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 LMF1Q96S06 567 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 TUBB6Q9BUF5 446 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 AGPAT4Q9NRZ5 378 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 PLA2G3Q9NZ20 509 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 GRHL1Q9NZI5 618 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 CTNNAL1Q9UBT7 734 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 C19orf25Q9UFG5 118 aaPredicted RBP9.78□□□□□ -0.84
RBM39-236ENST00000490484 SLC22A14Q9Y267 594 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 OARD1Q9Y530 152 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 SLC22A7Q9Y694 548 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 CPAMD8Q8IZJ3 1885 aa9.78□□□□□ -0.84
RBM39-236ENST00000490484 SCN3AQ9NY46 2000 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 NCF1BA6NI72 391 aaPredicted RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 NCF1CA8MVU1 366 aaPredicted RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 EIF3HO15372 352 aaKnown RBP eCLIP9.77□□□□□ -0.852e-16■□□□□ 9.9
RBM39-236ENST00000490484 GALR3O60755 368 aaPredicted RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 WDR47O94967 919 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CBX6O95503 412 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CYC1P08574 325 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 GP1BBP13224 206 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 NCF1P14598 390 aaPredicted RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 ALOX12P18054 663 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 HNF4AP41235 474 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 AP2B1P63010 937 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 POU4F1Q01851 419 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 ZNF33BQ06732 778 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 PWP1Q13610 501 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 USP10Q14694 798 aaKnown RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 ABRAXAS2Q15018 415 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 BTBD16Q32M84 506 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 NXPE4Q6UWF7 544 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 FAM180AQ6UWF9 173 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 ABHD13Q7L211 337 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CPEB2Q7Z5Q1 589 aaKnown RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 ANKRD37Q7Z713 158 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CCDC25Q86WR0 208 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CTAGE3PQ8IX95 158 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.77□□□□□ -0.85
RBM39-236ENST00000490484 SPATA6LQ8N4H0 392 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 AFAP1L2Q8N4X5 818 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 ANKRD53Q8N9V6 530 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 NT5CQ8TCD5 201 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 GRHL3Q8TE85 626 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 ANKRD7Q92527 254 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 TSLPQ969D9 159 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 CYTH2Q99418 400 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 RBBP8Q99708 897 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 BARD1Q99728 777 aaKnown RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 CPNE1Q99829 537 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 AIF1LQ9BQI0 150 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 MCMBPQ9BTE3 642 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 SARGQ9BW04 601 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 PELI2Q9HAT8 420 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 POPDC3Q9HBV1 291 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 ZFP69BQ9UJL9 534 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 MTO1Q9Y2Z2 717 aaKnown RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 UTP11Q9Y3A2 253 aaKnown RBP9.77□□□□□ -0.85
RBM39-236ENST00000490484 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 DOPEY1Q5JWR5 2465 aa9.77□□□□□ -0.85
RBM39-236ENST00000490484 A1L4Q6 167 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 E2F3O00716 465 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 DNAJB6O75190 326 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 WISP3O95389 354 aaPredicted RBP9.76□□□□□ -0.85
RBM39-236ENST00000490484 FHP07954 510 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 ICAM2P13598 275 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 AHRP35869 848 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 GP5P40197 560 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 GDF5P43026 501 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 AGTR2P50052 363 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 HNMTP50135 292 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 TNFSF10P50591 281 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 PLTPP55058 493 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 RAB8AP61006 207 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 ETF1P62495 437 aaKnown RBP9.76□□□□□ -0.85
RBM39-236ENST00000490484 SKP1P63208 163 aa9.76□□□□□ -0.85
RBM39-236ENST00000490484 CDKL1Q00532 357 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms