RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PEX11GQ96HA9 241 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-206ENST00000489142 NSMCE4AQ9NXX6 385 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 PLA2G3Q9NZ20 509 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 OARD1Q9Y530 152 aa13.25□□□□□ -0.29
VTI1A-206ENST00000489142 LOC102723996A0A087X1L8 192 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 FAM159BA6NKW6 160 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 EIF3HO15372 352 aaKnown RBP eCLIP13.24□□□□□ -0.29
VTI1A-206ENST00000489142 SEMA7AO75326 666 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 WDR47O94967 919 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 WISP3O95389 354 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-206ENST00000489142 ZNF888P0CJ79 500 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-206ENST00000489142 CCDC166P0CW27 439 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 REEP5Q00765 189 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 POU4F1Q01851 419 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 MFAP5Q13361 173 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 RBBP5Q15291 538 aaKnown RBP13.24□□□□□ -0.29
VTI1A-206ENST00000489142 DEFB134Q4QY38 66 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 TMEM205Q6UW68 189 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 NXPE4Q6UWF7 544 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 IGFL2Q6UWQ7 119 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 ISLR2Q6UXK2 745 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 ANKRD53Q8N9V6 530 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 PPP4R1Q8TF05 950 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 METTL21AQ8WXB1 218 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 PSMF1Q92530 271 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 CDKL2Q92772 493 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 EXT2Q93063 718 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 ESAMQ96AP7 390 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 MAGEB10Q96LZ2 347 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-206ENST00000489142 RBBP8Q99708 897 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 ZNF700Q9H0M5 742 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 EPS8L2Q9H6S3 715 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 TXNDC16Q9P2K2 825 aa13.24□□□□□ -0.29
VTI1A-206ENST00000489142 BLACEA4D250 179 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 AGFG2O95081 481 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 C1QAP02745 245 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 SERPINA7P05543 415 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 RNF224P0DH78 156 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 MAGEA4P43358 317 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 SCTRP47872 440 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 ST13P50502 369 aaKnown RBP13.23□□□□□ -0.29
VTI1A-206ENST00000489142 RAB8AP61006 207 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 CDC16Q13042 620 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 CBLBQ13191 982 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 ZNF169Q14929 603 aaPredicted RBP13.23□□□□□ -0.29
VTI1A-206ENST00000489142 OR4D1Q15615 310 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 KBTBD12Q3ZCT8 623 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 CRB2Q5IJ48 1285 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 ANKRD37Q7Z713 158 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 PRR7Q8TB68 274 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 FBF1Q8TES7 1133 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 TSLPQ969D9 159 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 CYTH2Q99418 400 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 GPR22Q99680 433 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 CPNE1Q99829 537 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 TMEM79Q9BSE2 394 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 SLC29A3Q9BZD2 475 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 DERL2Q9GZP9 239 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 RAB17Q9H0T7 212 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 POPDC3Q9HBV1 291 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
VTI1A-206ENST00000489142 COPG1Q9Y678 874 aaKnown RBP13.23□□□□□ -0.29
VTI1A-206ENST00000489142 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 C4orf51C9J302 202 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 TAPBPO15533 448 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 WFS1O76024 890 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SOX11P35716 441 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 GP5P40197 560 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 ARG2P78540 354 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 CDKL1Q00532 357 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SRSF11Q05519 484 aaKnown RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 RGS1Q08116 209 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 PWP1Q13610 501 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SLMAPQ14BN4 828 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 ABRAXAS2Q15018 415 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 HERC3Q15034 1050 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 TGFBIQ15582 683 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 TOR1AIP1Q5JTV8 583 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 UBAP2Q5T6F2 1119 aaKnown RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 FHL5Q5TD97 284 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 FCRLBQ6BAA4 426 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 ZNF572Q7Z3I7 529 aaPredicted RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 CPEB2Q7Z5Q1 589 aaKnown RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 AFAP1L2Q8N4X5 818 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 TBC1D19Q8N5T2 526 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 NT5CQ8TCD5 201 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 UTP15Q8TED0 518 aaKnown RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 ANKRD7Q92527 254 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 MRRFQ96E11 262 aaKnown RBP13.22□□□□□ -0.29
VTI1A-206ENST00000489142 TSPAN17Q96FV3 270 aa13.22□□□□□ -0.29
VTI1A-206ENST00000489142 AIF1LQ9BQI0 150 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms