RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SH2B3Q9UQQ2 575 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SLC22A14Q9Y267 594 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ANGPTL3Q9Y5C1 460 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SLC22A7Q9Y694 548 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 IGLV3-12A0A075B6K2 115 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ANKDD1BA6NHY2 528 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SYCE1LA8MT33 242 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CXorf49A8MYA2 514 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 MASP2O00187 686 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 FOXS1O43638 330 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CCNT2O60583 730 aaKnown RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SUPT3HO75486 399 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 STK16O75716 305 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 BMP10O95393 424 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SERPINA7P05543 415 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 INHBAP08476 426 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CYC1P08574 325 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ZNF888P0CJ79 500 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 AHRP35869 848 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SCTRP47872 440 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 AGTR2P50052 363 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SOX8P57073 446 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TAS2R50P59544 299 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 STXBP1P61764 594 aaKnown RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TLR1Q15399 786 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TGFBIQ15582 683 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 INPP5JQ15735 1006 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 NSDHLQ15738 373 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 PPP1R3AQ16821 1122 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 FAM83EQ2M2I3 478 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 DEFB134Q4QY38 66 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 XKR6Q5GH73 641 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 PAGE2BQ5JRK9 111 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CATSPEREQ5SY80 951 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ABHD17BQ5VST6 288 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TMEM207Q6UWW9 146 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TMIGD1Q6UXZ0 262 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CYS1Q717R9 158 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 AMER3Q8N944 861 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 GALNT11Q8NCW6 608 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 KIF18AQ8NI77 898 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 STAG3L4Q8TBR4 150 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ANKRD49Q8WVL7 239 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 MIB2Q96AX9 1013 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 PEX11GQ96HA9 241 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 LRRC1Q9BTT6 524 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 TUBB6Q9BUF5 446 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 RHBGQ9H310 441 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ZNF552Q9H707 407 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 NMRAL1Q9HBL8 299 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 SMYD2Q9NRG4 433 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 PTGFRNQ9P2B2 879 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 ACOT9Q9Y305 439 aa8.64□□□□□ -1.03
HDAC6-232ENST00000489053 MRPS2Q9Y399 296 aaKnown RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 COPG1Q9Y678 874 aaKnown RBP8.64□□□□□ -1.03
HDAC6-232ENST00000489053 BSNQ9UPA5 3926 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 A0A087X1B8 175 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 A8MUI8 341 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 TP73O15350 636 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 LCMT2O60294 686 aaKnown RBP8.63□□□□□ -1.03
HDAC6-232ENST00000489053 B4GALT2O60909 372 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 CDC123O75794 336 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-232ENST00000489053 AGFG2O95081 481 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 FHP07954 510 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 LTA4HP09960 611 aaKnown RBP8.63□□□□□ -1.03
HDAC6-232ENST00000489053 PRR35P0CG20 571 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 COX6A1P12074 109 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 GFAPP14136 432 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 TFEBP19484 476 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 GSTM2P28161 218 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 ARL1P40616 181 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-232ENST00000489053 SERPINB8P50452 374 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 GPX6P59796 221 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 RAB8AP61006 207 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 REEP5Q00765 189 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 IRF8Q02556 426 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 CBLBQ13191 982 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 MFAP5Q13361 173 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 LAPTM5Q13571 262 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 RCN2Q14257 317 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 PDK4Q16654 411 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 BTBD16Q32M84 506 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 GLE1Q53GS7 698 aaKnown RBP8.63□□□□□ -1.03
HDAC6-232ENST00000489053 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 CDKL4Q5MAI5 379 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 FHL5Q5TD97 284 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 ATG9BQ674R7 924 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 FAM180AQ6UWF9 173 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 IGFL3Q6UXB1 125 aa8.63□□□□□ -1.03
HDAC6-232ENST00000489053 LAPTM4BQ86VI4 370 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms