RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TGFBIQ15582 683 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 OR4D1Q15615 310 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 PLEKHN1Q494U1 663 aaPredicted RBP16.78■□□□□ 0.28
ITGB1-215ENST00000488494 NXPE4Q6UWF7 544 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 CMC1Q7Z7K0 106 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 KBTBD2Q8IY47 623 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 IQCKQ8N0W5 287 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 EXT2Q93063 718 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 WDR77Q9BQA1 342 aaPredicted RBP16.78■□□□□ 0.28
ITGB1-215ENST00000488494 AIF1LQ9BQI0 150 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 TMEM79Q9BSE2 394 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 WWOXQ9NZC7 414 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 ZFP69BQ9UJL9 534 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 VPS4AQ9UN37 437 aa16.78■□□□□ 0.28
ITGB1-215ENST00000488494 LOC102723996A0A087X1L8 192 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 CELA2AP08217 269 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 PRR35P0CG20 571 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 ZNF888P0CJ79 500 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-215ENST00000488494 VARSP26640 1264 aaKnown RBP16.77■□□□□ 0.28
ITGB1-215ENST00000488494 AHRP35869 848 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 GDF5P43026 501 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 ATP6V0D1P61421 351 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 PCOLCEQ15113 449 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 DEFB134Q4QY38 66 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 GRTP1Q5TC63 336 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 TMEM205Q6UW68 189 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 LINC00696Q6ZRV3 163 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 LANCL3Q6ZV70 420 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 GPSM1Q86YR5 675 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 KLHDC8AQ8IYD2 350 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 AFAP1L2Q8N4X5 818 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 ANKRD53Q8N9V6 530 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 GALNT11Q8NCW6 608 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 OR5T3Q8NGG3 340 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 NT5CQ8TCD5 201 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 PPP4R1Q8TF05 950 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 METTL21AQ8WXB1 218 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 ZNF700Q9H0M5 742 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 EPS8L2Q9H6S3 715 aa16.77■□□□□ 0.28
ITGB1-215ENST00000488494 PTPN13Q12923 2485 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 GALR3O60755 368 aaPredicted RBP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 CDC123O75794 336 aaPredicted RBP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 B3GALT4O96024 378 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 SERPINA7P05543 415 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 UQCRHP07919 91 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 SLC35E2BP0CK96 405 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 ALOX12P18054 663 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 GNLYP22749 145 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 HNF4AP41235 474 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 OLR1P78380 273 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 CDC16Q13042 620 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 MFAP5Q13361 173 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 RBBP5Q15291 538 aaKnown RBP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 FBXO48Q5FWF7 155 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 IGFL2Q6UWQ7 119 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 ISLR2Q6UXK2 745 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 Q6ZS92 163 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 RAPH1Q70E73 1250 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 ABHD13Q7L211 337 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 CUZD1Q86UP6 607 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 TCAIMQ8N3R3 496 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 NOA1Q8NC60 698 aaKnown RBP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 BRIX1Q8TDN6 353 aaKnown RBP16.76■□□□□ 0.27
ITGB1-215ENST00000488494 PEX11GQ96HA9 241 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 CNDP1Q96KN2 507 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 PTGFRNQ9P2B2 879 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 PCDHGA10Q9Y5H3 936 aa16.76■□□□□ 0.27
ITGB1-215ENST00000488494 IGHV3-20A0A0C4DH32 117 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 OR2W5A6NFC9 320 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SEC24DO94855 1032 aaPredicted RBP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 S100BP04271 92 aaPredicted RBP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 CYC1P08574 325 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 GNAZP19086 355 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 HSPA7P48741 367 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SKP1P63208 163 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 BMPR2Q13873 1038 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SLBPQ14493 270 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 CRB2Q5IJ48 1285 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SLCO4C1Q6ZQN7 724 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SIRT6Q8N6T7 355 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 AMER2Q8N7J2 671 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SNX31Q8N9S9 440 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 MRRFQ96E11 262 aaKnown RBP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 UBXN10Q96LJ8 280 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 OR1F2PQ96R84 312 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SLC29A3Q9BZD2 475 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 SLC6A16Q9GZN6 736 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 ALG9Q9H6U8 611 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 CNOT10Q9H9A5 744 aaKnown RBP16.75■□□□□ 0.27
ITGB1-215ENST00000488494 CD274Q9NZQ7 290 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 RNF112Q9ULX5 631 aa16.75■□□□□ 0.27
ITGB1-215ENST00000488494 USP9XQ93008 2570 aaPredicted RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 C4orf51C9J302 202 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 TAPBPO15533 448 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 C1GALT1C1LP0DN25 315 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 SOX11P35716 441 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms