RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NFYCQ13952 458 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ZNF423Q2M1K9 1284 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 SPATS1Q496A3 300 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ADNP2Q6IQ32 1131 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 IYDQ6PHW0 289 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 AMIGO1Q86WK6 493 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 LCN9Q8WX39 176 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 STARD8Q92502 1023 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 JADE3Q92613 823 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 TESCQ96BS2 214 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 LRRC58Q96CX6 371 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 NRTNQ99748 197 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 SPNS1Q9H2V7 528 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 CUEDC1Q9NWM3 386 aaPredicted RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 ADA2Q9NZK5 511 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 TMEM181Q9P2C4 612 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 FXYD1O00168 92 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 ETHE1O95571 254 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 CTSEP14091 401 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 PRPS1L1P21108 318 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 HRH2P25021 359 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 HNRNPH1P31943 449 aaKnown RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 SLC19A1P41440 591 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 MEF2AQ02078 507 aaPredicted RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 CEACAM7Q14002 265 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 SHBQ15464 509 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 DPY19L1Q2PZI1 675 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 SAMD4BQ5PRF9 694 aaKnown RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 GALNT18Q6P9A2 607 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 SLCO6A1Q86UG4 719 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 STMN2Q93045 179 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
NELFE-209ENST00000488426 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 PRM3Q9NNZ6 103 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 POT1Q9NUX5 634 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 TAAR2Q9P1P5 351 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 BCAP29Q9UHQ4 241 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 ANGPTL2Q9UKU9 493 aa12.19□□□□□ -0.46
NELFE-209ENST00000488426 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 PRAMEF33A0A0G2JMD5 474 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 ANKDD1BA6NHY2 528 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SEMA3DO95025 777 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 PGRP06401 933 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 XRCC1P18887 633 aaPredicted RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 TACR1P25103 407 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 GSTM2P28161 218 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TIA1P31483 386 aaKnown RBP eCLIP12.18□□□□□ -0.46
NELFE-209ENST00000488426 ASMTP46597 345 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SLC14A1Q13336 389 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 RBBP5Q15291 538 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 TCEA2Q15560 299 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TRIP6Q15654 476 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 FAM174BQ3ZCQ3 159 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 PAGE3Q5JUK9 113 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 MSANTD1Q6ZTZ1 278 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 ARPINQ7Z6K5 226 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TRIM48Q8IWZ4 208 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 RIMKLAQ8IXN7 391 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.18□□□□□ -0.46
NELFE-209ENST00000488426 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 ZNF740Q8NDX6 193 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TTLQ8NG68 377 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 DNAJB8Q8NHS0 232 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SLC13A3Q8WWT9 602 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SLC22A18Q96BI1 424 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TMEM74Q96NL1 305 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TSSK3Q96PN8 268 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 SCNM1Q9BWG6 230 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TWSG1Q9GZX9 223 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TCEAL2Q9H3H9 227 aaPredicted RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 MRPS30Q9NP92 439 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 SUCOQ9UBS9 1254 aaKnown RBP12.18□□□□□ -0.46
NELFE-209ENST00000488426 KLF15Q9UIH9 416 aa12.18□□□□□ -0.46
NELFE-209ENST00000488426 TP53BP1Q12888 1972 aaPredicted RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 TRBC2A0A5B9 178 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 FAM221BA6H8Z2 402 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 H7BY64 318 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 VILLO15195 856 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 CHRM5P08912 532 aaPredicted RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 CMPK1P30085 196 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 SLC7A2P52569 658 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 DGKQP52824 942 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 YBX1P67809 324 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 CSNK1G2P78368 415 aa12.17□□□□□ -0.46
NELFE-209ENST00000488426 RAE1P78406 368 aaKnown RBP12.17□□□□□ -0.46
NELFE-209ENST00000488426 SHC2P98077 582 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms