RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CD9P21926 228 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 COMTP21964 271 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 BMP5P22003 454 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 CTNNA1P35221 906 aaKnown RBP10.89□□□□□ -0.67
TRIM56-204ENST00000487252 MLF1P58340 268 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 TAS2R50P59544 299 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 XIAPP98170 497 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 SLC25A11Q02978 314 aaKnown RBP10.89□□□□□ -0.67
TRIM56-204ENST00000487252 GBE1Q04446 702 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 ACKR1Q16570 336 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 FAM153CQ494X1 144 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 SIRPB2Q5JXA9 342 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 PPP1R2P3Q6NXS1 205 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 GLT6D1Q7Z4J2 308 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 UBL4BQ8N7F7 174 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 LMNTD1Q8N9Z9 388 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 HEXDCQ8WVB3 486 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 MMABQ96EY8 250 aaPredicted RBP10.89□□□□□ -0.67
TRIM56-204ENST00000487252 TRIM11Q96F44 468 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 CCL19Q99731 98 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 FICDQ9BVA6 458 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 VPS37BQ9H9H4 285 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
TRIM56-204ENST00000487252 ZNF629Q9UEG4 869 aaPredicted RBP10.89□□□□□ -0.67
TRIM56-204ENST00000487252 FAM153AQ9UHL3 310 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 PRDM4Q9UKN5 801 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 NFU1Q9UMS0 254 aa10.89□□□□□ -0.67
TRIM56-204ENST00000487252 DYSFO75923 2080 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 GOLGA8KD6RF30 607 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 LIN7AO14910 233 aaPredicted RBP10.88□□□□□ -0.67
TRIM56-204ENST00000487252 KDM1AO60341 852 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 FGGP02679 453 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
TRIM56-204ENST00000487252 AGTR2P50052 363 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 DPYSL3Q14195 570 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 GRB7Q14451 532 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 SF1Q15637 639 aaKnown RBP10.88□□□□□ -0.67
TRIM56-204ENST00000487252 CYP1B1Q16678 543 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 RGS9BPQ6ZS82 235 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 TRILQ7L0X0 811 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 ZNF771Q7L3S4 317 aaPredicted RBP10.88□□□□□ -0.67
TRIM56-204ENST00000487252 MEIOBQ8N635 442 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 MAPK1IP1LQ8NDC0 245 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 CABS1Q96KC9 395 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 COPS8Q99627 209 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 CEP41Q9BYV8 373 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 DDX47Q9H0S4 455 aaKnown RBP10.88□□□□□ -0.67
TRIM56-204ENST00000487252 SYNPO2LQ9H987 977 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 FAM114A2Q9NRY5 505 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 DEPPQ9NTK1 212 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 JKAMPQ9P055 326 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 PCDHA3Q9Y5H8 950 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
TRIM56-204ENST00000487252 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 FEZF1A0PJY2 475 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 ARHGEF33A8MVX0 844 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 QSOX1O00391 747 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 AQP7O14520 342 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 GLSO94925 669 aaPredicted RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 EIF2S1P05198 315 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 ANXA5P08758 320 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 GABRA1P14867 456 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 MARCKSL1P49006 195 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 SLC26A5P58743 744 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 GPR85P60893 370 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PPIAP62937 165 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 DHX34Q14147 1143 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 USP10Q14694 798 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 TRADDQ15628 312 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 HYAL4Q2M3T9 481 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 GARNL3Q5VVW2 1013 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 FBXO42Q6P3S6 717 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 MDGA2Q7Z553 956 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PCGF5Q86SE9 256 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 KIF2BQ8N4N8 673 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PQLC3Q8N755 202 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 CCNYQ8ND76 341 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 OR2L8Q8NGY9 312 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 KRT35Q92764 455 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 FAF2Q96CS3 445 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 LRTM1Q9HBL6 345 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 ZNF701Q9NV72 531 aaPredicted RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 CDC42EP3Q9UKI2 254 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 RUVBL1Q9Y265 456 aaKnown RBP10.87□□□□□ -0.67
TRIM56-204ENST00000487252 PCDHGB3Q9Y5G1 929 aa10.87□□□□□ -0.67
TRIM56-204ENST00000487252 KIAA1549Q9HCM3 1950 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 A0A0A6YYC8 382 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 GOLGA6L10A0A0M3HER8 536 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 SLC5A10A0PJK1 596 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 OR2A25A4D2G3 310 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 PINLYPA6NC86 204 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms