RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 FRG2BQ96QU4 278 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 HBEGFQ99075 208 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 MTERF1Q99551 399 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 NRSN2Q9GZP1 204 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 PITHD1Q9GZP4 211 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 AICDAQ9GZX7 198 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 SPRTNQ9H040 489 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 STARD5Q9NSY2 213 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 OCIAD1Q9NX40 245 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 SNX6Q9UNH7 406 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 PLCL2Q9UPR0 1127 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 DNAJC15Q9Y5T4 150 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 PTGDR2Q9Y5Y4 395 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 AP1M2Q9Y6Q5 423 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF195O14628 629 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 P2RX6O15547 441 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 MAP3K7O43318 606 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SH3BGRLO75368 114 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ULK1O75385 1050 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 KRT6AP02538 564 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 KRT6BP04259 564 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 EIF2S1P05198 315 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 JUNP05412 331 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SERPIND1P05546 499 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 CCL4P13236 92 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 AHRP35869 848 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 KRT6CP48668 564 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SEC24CP53992 1094 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 VSX2P58304 361 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 RPS13P62277 151 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SNRPNP63162 240 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 HYAL2Q12891 473 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 IFT88Q13099 833 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ZC3H12BQ5HYM0 836 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 TMTC4Q5T4D3 741 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 WDR75Q8IWA0 830 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 TBC1D19Q8N5T2 526 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 TWIST2Q8WVJ9 160 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 THAP11Q96EK4 314 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF285Q96NJ3 590 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 KLHL31Q9H511 634 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ELOVL6Q9H5J4 265 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ZFP69BQ9UJL9 534 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 CLCA2Q9UQC9 943 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 TSC22D4Q9Y3Q8 395 aa12.19□□□□□ -0.46
HDAC6-229ENST00000486665 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 PMS2P1A4D2B8 440 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 ANKDD1BA6NHY2 528 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 EFCAB7A8K855 629 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 MAGEB17A8MXT2 336 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 H3BMH7 237 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 TMX2-CTNND1H3BSU7 103 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 FOXE1O00358 373 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 SRPX2O60687 465 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 SKAP2O75563 359 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 CLEC3AO75596 197 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 ETHE1O95571 254 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 TGFB1P01137 390 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 LINC00032P0C843 101 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 PIK3CBP42338 1070 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 TLE3Q04726 772 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 BTKQ06187 659 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 HKDC1Q2TB90 917 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 WASHC2DQ5SRD0 308 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 LRRC69Q6ZNQ3 347 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 ASPGQ86U10 573 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 SPACA3Q8IXA5 215 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 BMPERQ8N8U9 685 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 PIWIL2Q8TC59 973 aaKnown RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 NT5CQ8TCD5 201 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 SLC13A3Q8WWT9 602 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 CCT6BQ92526 530 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 FGF11Q92914 225 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF501Q96CX3 271 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 REPS1Q96D71 796 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 THOC1Q96FV9 657 aaKnown RBP12.18□□□□□ -0.46
HDAC6-229ENST00000486665 C3orf30Q96M34 536 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 DEPDC7Q96QD5 511 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 F2RL3Q96RI0 385 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 CCL27Q9Y4X3 112 aa12.18□□□□□ -0.46
HDAC6-229ENST00000486665 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 SERTM1A2A2V5 107 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 GMNCA6NCL1 334 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 LRIT2A6NDA9 550 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 TMEM150CB9EJG8 249 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-229ENST00000486665 NDUFS4O43181 175 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms