RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NXPE4Q6UWF7 544 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 NDUFAF7Q7L592 441 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 CMC1Q7Z7K0 106 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 IQCKQ8N0W5 287 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 RBMXL3Q8N7X1 1067 aaKnown RBP12.2□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF740Q8NDX6 193 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 OR4K1Q8NGD4 311 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 OR51Q1Q8NH59 317 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 CCT6BQ92526 530 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 MIB2Q96AX9 1013 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 RHBDF1Q96CC6 855 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 TM4SF19Q96DZ7 209 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
CHMP3-208ENST00000486404 CNDP1Q96KN2 507 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 WDR77Q9BQA1 342 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF552Q9H707 407 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-208ENST00000486404 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 VPS4AQ9UN37 437 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 SLC22A7Q9Y694 548 aa12.2□□□□□ -0.46
CHMP3-208ENST00000486404 SHANK1Q9Y566 2161 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 IGHV1-45A0A0A0MS14 117 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 SUPT3HB4E1H0 165 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CLGNO14967 610 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 H2AFYO75367 372 aaKnown RBP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 SUPT3HO75486 399 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 FAM155BO75949 473 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 WISP3O95389 354 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 BMP10O95393 424 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CYC1P08574 325 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF888P0CJ79 500 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 ALOX12P18054 663 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 VARSP26640 1264 aaKnown RBP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CRABP2P29373 138 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 HNF4AP41235 474 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CD97P48960 835 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 SLBPQ14493 270 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 OR4D1Q15615 310 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 PDK4Q16654 411 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 C18orf21Q32NC0 220 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-208ENST00000486404 DEFB134Q4QY38 66 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 KRT78Q8N1N4 520 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 MMGT1Q8N4V1 131 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 TRPV3Q8NET8 790 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 NT5CQ8TCD5 201 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 IFT81Q8WYA0 676 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CYTH2Q99418 400 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 FMO2Q99518 471 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 MESP1Q9BRJ9 268 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 SARGQ9BW04 601 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CAPS2Q9BXY5 557 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 VN1R1Q9GZP7 353 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 TSPYL1Q9H0U9 437 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 SPNS1Q9H2V7 528 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 ALG9Q9H6U8 611 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 DNAJC11Q9NVH1 559 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 NUDT4Q9NZJ9 180 aa12.19□□□□□ -0.46
CHMP3-208ENST00000486404 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 JRKO75564 520 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 CDC123O75794 336 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 SLC35E2BP0CK96 405 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 JAK1P23458 1154 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 GDF5P43026 501 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 SLC6A12P48065 614 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 HSPA7P48741 367 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 BMPR2Q13873 1038 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 INPP5JQ15735 1006 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 CRB2Q5IJ48 1285 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 TOR1AIP1Q5JTV8 583 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 CDKL4Q5MAI5 379 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 ATG9BQ674R7 924 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 SULT1C3Q6IMI6 304 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 ISLR2Q6UXK2 745 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 PDSS2Q86YH6 399 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 NOA1Q8NC60 698 aaKnown RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 PDPRQ8NCN5 879 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 TTLQ8NG68 377 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 PPP4R1Q8TF05 950 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 KIAA1191Q96A73 305 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 MOCOSQ96EN8 888 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 PEX11GQ96HA9 241 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 OR1F2PQ96R84 312 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 TMEM79Q9BSE2 394 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF700Q9H0M5 742 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 NMRAL1Q9HBL8 299 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 NINJ2Q9NZG7 142 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 GPRC5BQ9NZH0 403 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 IKBKGQ9Y6K9 419 aa12.18□□□□□ -0.46
CHMP3-208ENST00000486404 RP1L1Q8IWN7 2480 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-208ENST00000486404 A0A087X1B8 175 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 A0A1W2PQ72 361 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 PSMD12O00232 456 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms