RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SERPIND1P05546 499 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 ECHS1P30084 290 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 AHRP35869 848 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 GGT5P36269 586 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 EEF1A2Q05639 463 aaKnown RBP18.49■□□□□ 0.55
SNX5-213ENST00000486039 TMEM205Q6UW68 189 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 RAPH1Q70E73 1250 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 NDUFAF7Q7L592 441 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 RELL1Q8IUW5 271 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 TBC1D19Q8N5T2 526 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 NT5CQ8TCD5 201 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 ESAMQ96AP7 390 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 MRRFQ96E11 262 aaKnown RBP18.49■□□□□ 0.55
SNX5-213ENST00000486039 AIF1LQ9BQI0 150 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 MTRF1LQ9UGC7 380 aaKnown RBP18.49■□□□□ 0.55
SNX5-213ENST00000486039 MKL2Q9ULH7 1088 aa18.49■□□□□ 0.55
SNX5-213ENST00000486039 LOC102723996A0A087X1L8 192 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 DNAJB6O75190 326 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 IPO13O94829 963 aaKnown RBP18.48■□□□□ 0.55
SNX5-213ENST00000486039 B3GALT4O96024 378 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 CXCR2P25025 360 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 XCR1P46094 333 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 HYAL2Q12891 473 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 BMPR2Q13873 1038 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 HERC3Q15034 1050 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 RBBP5Q15291 538 aaKnown RBP18.48■□□□□ 0.55
SNX5-213ENST00000486039 GLE1Q53GS7 698 aaKnown RBP18.48■□□□□ 0.55
SNX5-213ENST00000486039 CDKL4Q5MAI5 379 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 SULT1C3Q6IMI6 304 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 SLCO4C1Q6ZQN7 724 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 ISCA2Q86U28 154 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 TCAIMQ8N3R3 496 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 EFCAB3Q8N7B9 438 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 AMER2Q8N7J2 671 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 PDPRQ8NCN5 879 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 OR5T3Q8NGG3 340 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 CPT1CQ8TCG5 803 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 IFT81Q8WYA0 676 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 PNPLA2Q96AD5 504 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 THOC3Q96J01 351 aaKnown RBP18.48■□□□□ 0.55
SNX5-213ENST00000486039 VN1R1Q9GZP7 353 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 LHPPQ9H008 270 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 IGSF5Q9NSI5 407 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 WWOXQ9NZC7 414 aa18.48■□□□□ 0.55
SNX5-213ENST00000486039 IGHV1-45A0A0A0MS14 117 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 NSG1A0A0A6YYJ2 146 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 OR2W5A6NFC9 320 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 ZNF860A6NHJ4 632 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 GALR3O60755 368 aaPredicted RBP18.47■□□□□ 0.55
SNX5-213ENST00000486039 PRAMEF4O60810 478 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 VPS4BO75351 444 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 C1GALT1C1LP0DN25 315 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 ALOX12P18054 663 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 GNAZP19086 355 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 CRABP2P29373 138 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 HSPA7P48741 367 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 RGS1Q08116 209 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 CDC16Q13042 620 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 PCOLCEQ15113 449 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 PLEKHN1Q494U1 663 aaPredicted RBP18.47■□□□□ 0.55
SNX5-213ENST00000486039 MROH9Q5TGP6 573 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 PRAMEF9Q5VWM5 478 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 KIF18AQ8NI77 898 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 UTP15Q8TED0 518 aaKnown RBP18.47■□□□□ 0.55
SNX5-213ENST00000486039 CREB3L4Q8TEY5 395 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 CYTH2Q99418 400 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 SLC6A16Q9GZN6 736 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 AICDAQ9GZX7 198 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 CDC42EP4Q9H3Q1 356 aaKnown RBP18.47■□□□□ 0.55
SNX5-213ENST00000486039 ALG9Q9H6U8 611 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 GPRC5BQ9NZH0 403 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 CD274Q9NZQ7 290 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 PTBP2Q9UKA9 531 aaKnown RBP18.47■□□□□ 0.55
SNX5-213ENST00000486039 RNF112Q9ULX5 631 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 VPS4AQ9UN37 437 aa18.47■□□□□ 0.55
SNX5-213ENST00000486039 LRRK2Q5S007 2527 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 PCDH17O14917 1159 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 LTA4HP09960 611 aaKnown RBP18.46■□□□□ 0.55
SNX5-213ENST00000486039 ZNF888P0CJ79 500 aaPredicted RBP18.46■□□□□ 0.55
SNX5-213ENST00000486039 C8orf89P0DMQ9 161 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 TFEBP19484 476 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 PHBP35232 272 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 SLBPQ14493 270 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX5-213ENST00000486039 MINDY4Q4G0A6 757 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 DEFB134Q4QY38 66 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 PRR30Q53SZ7 412 aaPredicted RBP18.46■□□□□ 0.55
SNX5-213ENST00000486039 AGAP7PQ5VUJ5 663 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 IGFL2Q6UWQ7 119 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 CEP128Q6ZU80 1094 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 TBC1D1Q86TI0 1168 aaPredicted RBP18.46■□□□□ 0.55
SNX5-213ENST00000486039 GALNT11Q8NCW6 608 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 TRPV3Q8NET8 790 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 STAG3L4Q8TBR4 150 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 EXT2Q93063 718 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 NXNL1Q96CM4 212 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 PEX11GQ96HA9 241 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 AGAP4Q96P64 663 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 ATOH8Q96SQ7 321 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 CAPS2Q9BXY5 557 aa18.46■□□□□ 0.55
SNX5-213ENST00000486039 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms