RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZNF888P0CJ79 500 aaPredicted RBP16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CD1DP15813 335 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 GNLYP22749 145 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 SCTRP47872 440 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 UQCRFS1P47985 274 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 HNMTP50135 292 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 RAB8AP61006 207 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 TGFBIQ15582 683 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 OR4D1Q15615 310 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 DEFB134Q4QY38 66 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CYS1Q717R9 158 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CTAGE6Q86UF2 777 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 SIRT6Q8N6T7 355 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 SNX31Q8N9S9 440 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 DNAJB14Q8TBM8 379 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CCT6BQ92526 530 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 RHBDF1Q96CC6 855 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 VN1R1Q9GZP7 353 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 RHBGQ9H310 441 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 EPS8L2Q9H6S3 715 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 RNF112Q9ULX5 631 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CSAG2Q9Y5P2 127 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 IGHV1-45A0A0A0MS14 117 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 CLGNO14967 610 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
COL6A1-204ENST00000486023 F10P00742 488 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 C1QAP02745 245 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 S100BP04271 92 aaPredicted RBP16.69■□□□□ 0.26
COL6A1-204ENST00000486023 EFNA3P52797 238 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 ATP6V0D1P61421 351 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 CDKL1Q00532 357 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 ILF2Q12905 390 aaKnown RBP16.69■□□□□ 0.26
COL6A1-204ENST00000486023 BMPR2Q13873 1038 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 LANCL3Q6ZV70 420 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 IQCKQ8N0W5 287 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 ANKRD53Q8N9V6 530 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 BRIX1Q8TDN6 353 aaKnown RBP16.69■□□□□ 0.26
COL6A1-204ENST00000486023 CYTH2Q99418 400 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 FAM129AQ9BZQ8 928 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 PELI2Q9HAT8 420 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 PLA2G3Q9NZ20 509 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 ZFP69BQ9UJL9 534 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 FLNCQ14315 2725 aa16.69■□□□□ 0.26
COL6A1-204ENST00000486023 SPENQ96T58 3664 aaKnown RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 A8MUI8 341 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 TAPBPO15533 448 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 B4GALT2O60909 372 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 PRR35P0CG20 571 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 C1GALT1C1LP0DN25 315 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 ALOX12P18054 663 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 GNAZP19086 355 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 HSPA7P48741 367 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 REEP5Q00765 189 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 PWP1Q13610 501 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 HERC3Q15034 1050 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 MROH9Q5TGP6 573 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 IGFL3Q6UXB1 125 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 ISLR2Q6UXK2 745 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 NOA1Q8NC60 698 aaKnown RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 CATSPER1Q8NEC5 780 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 SNRNP40Q96DI7 357 aaKnown RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 KLHL31Q9H511 634 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 RIC8BQ9NVN3 520 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 MTRF1LQ9UGC7 380 aaKnown RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 COPG1Q9Y678 874 aaKnown RBP16.68■□□□□ 0.26
COL6A1-204ENST00000486023 SLC22A7Q9Y694 548 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 HEATR5BQ9P2D3 2071 aa16.68■□□□□ 0.26
COL6A1-204ENST00000486023 ANKRD12Q6UB98 2062 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 A0A0G2JN53 185 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 CHST10O43529 356 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 CCNT2O60583 730 aaKnown RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 GALR3O60755 368 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 AHRP35869 848 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 ARG2P78540 354 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 CDC16Q13042 620 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 SLBPQ14493 270 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 PCOLCEQ15113 449 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 B3GNTL1Q67FW5 361 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 ABHD13Q7L211 337 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 NT5CQ8TCD5 201 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 WDR77Q9BQA1 342 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 PHACTR1Q9C0D0 580 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 ZNF700Q9H0M5 742 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 CNOT10Q9H9A5 744 aaKnown RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 ZDHHC18Q9NUE0 388 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 DNAJC11Q9NVH1 559 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 ASF1BQ9NVP2 202 aa16.67■□□□□ 0.26
COL6A1-204ENST00000486023 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
COL6A1-204ENST00000486023 TCP11X1B4DZS4 312 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SUPT3HB4E1H0 165 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SUPT3HO75486 399 aa16.66■□□□□ 0.26
COL6A1-204ENST00000486023 WISP3O95389 354 aaPredicted RBP16.66■□□□□ 0.26
COL6A1-204ENST00000486023 SERPINA7P05543 415 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms