RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 WDR4P57081 412 aaKnown RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 SKP1P63208 163 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 MEF2AQ02078 507 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 C2orf54Q08AI8 447 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 GTF3C1Q12789 2109 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TGFBIQ15582 683 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TRADDQ15628 312 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 INPP5JQ15735 1006 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 KBTBD12Q3ZCT8 623 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 PLEKHN1Q494U1 663 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 AGAP7PQ5VUJ5 663 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SULT1C3Q6IMI6 304 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 H3F3CQ6NXT2 135 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 NXPE4Q6UWF7 544 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 MBOAT1Q6ZNC8 495 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ADCK2Q7Z695 626 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ASPGQ86U10 573 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 THOC6Q86W42 341 aaKnown RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 PLD3Q8IV08 490 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TMEM151BQ8IW70 566 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 CNPY4Q8N129 248 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 Q8NA96 180 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TTLQ8NG68 377 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 OR51Q1Q8NH59 317 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 STAG3L4Q8TBR4 150 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 PPP4R1Q8TF05 950 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SLC5A11Q8WWX8 675 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 HAS2Q92819 552 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 NEIL2Q969S2 332 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 KIAA1191Q96A73 305 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 PYCR2Q96C36 320 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 WDR34Q96EX3 536 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 IMMP1LQ96LU5 166 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 AGAP4Q96P64 663 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 OR1F2PQ96R84 312 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 AIF1LQ9BQI0 150 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 DIDO1Q9BTC0 2240 aaKnown RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 LRRC1Q9BTT6 524 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TUBB6Q9BUF5 446 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ZNF700Q9H0M5 742 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 EHD1Q9H4M9 534 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SOX17Q9H6I2 414 aaPredicted RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 ZFAND3Q9H8U3 227 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ANKHQ9HCJ1 492 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 ZDHHC18Q9NUE0 388 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TXNDC16Q9P2K2 825 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 TRPC4Q9UBN4 977 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 FBXL4Q9UKA2 621 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 PTBP2Q9UKA9 531 aaKnown RBP6.63□□□□□ -1.35
VPS50-218ENST00000485994 IKZF3Q9UKT9 509 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SLC22A14Q9Y267 594 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 B3GNT3Q9Y2A9 372 aa6.63□□□□□ -1.35
VPS50-218ENST00000485994 SPENQ96T58 3664 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 COL12A1Q99715 3063 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 NSG1A0A0A6YYJ2 146 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 FEZF1A0PJY2 475 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 A6NL46 340 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 TTLL8A6PVC2 850 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MAP2K7O14733 419 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 GALR3O60755 368 aaPredicted RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 ALOX12BO75342 701 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 H2AFYO75367 372 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 GUCA1CO95843 209 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SERPINA7P05543 415 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 HEXBP07686 556 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SLC35G6P0C7Q6 338 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 PRR35P0CG20 571 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 CCDC166P0CW27 439 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 C1GALT1C1LP0DN25 315 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 COX6A1P12074 109 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 ITGA3P26006 1051 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 HPDP32754 393 aaPredicted RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 STX2P32856 288 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 AGTR2P50052 363 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 PGGT1BP53609 377 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MLLT10P55197 1068 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 FOXL2P58012 376 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 RAB10P61026 200 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 MRPS25P82663 173 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 REEP5Q00765 189 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 Q0VFX4 171 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 HYAL2Q12891 473 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 USP10Q14694 798 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 TSNQ15631 228 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 TBCCQ15814 346 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 IGFBP7Q16270 282 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 NADK2Q4G0N4 442 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 CATSPEREQ5SY80 951 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 B3GNTL1Q67FW5 361 aaPredicted RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 SLC6A19Q695T7 634 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 METTL2BQ6P1Q9 378 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 ISLR2Q6UXK2 745 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 SLCO4C1Q6ZQN7 724 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 ISCA2Q86U28 154 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 ZC3H7AQ8IWR0 971 aaKnown RBP6.62□□□□□ -1.35
VPS50-218ENST00000485994 KBTBD2Q8IY47 623 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 IQCKQ8N0W5 287 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 DTWD1Q8N5C7 304 aa6.62□□□□□ -1.35
VPS50-218ENST00000485994 KCT2Q8NC54 265 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms