RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ZFP69BQ9UJL9 534 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ACSL6Q9UKU0 697 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 SGK494L7N484 410 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 UBFD1O14562 309 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 FOXS1O43638 330 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CNOT3O75175 753 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 OR4F21O95013 312 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ZNF888P0CJ79 500 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 HRH2P25021 359 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 STAT5AP42229 794 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 HYAL2Q12891 473 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 DEFB134Q4QY38 66 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SGO1Q5FBB7 561 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CES4AQ5XG92 561 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 C19orf48Q6RUI8 117 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 FAM198BQ6UWH4 519 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ATG14Q6ZNE5 492 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 HDXQ7Z353 690 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SYVN1Q86TM6 617 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 OR5T3Q8NGG3 340 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 AGR3Q8TD06 166 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CREB3L4Q8TEY5 395 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 MMABQ96EY8 250 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 SORBS1Q9BX66 1292 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 GSTO2Q9H4Y5 243 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 PADI1Q9ULC6 663 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SPENQ96T58 3664 aaKnown RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 A0A1B0GX78 115 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 CCDC189A1A4V9 331 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 FITM1A5D6W6 292 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 OR2W5A6NFC9 320 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 RTCAO00442 366 aaKnown RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 TGFB1P01137 390 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 KLK3P07288 261 aaPredicted RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 IMPDH1P20839 514 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 ETV4P43268 484 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 PLA2G16P53816 162 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 FOXA1P55317 472 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 TLE3Q04726 772 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 ABHD18Q0P651 414 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 ZRSR2Q15696 482 aaKnown RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 TOR1AIP1Q5JTV8 583 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 KRT78Q8N1N4 520 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 ESX1Q8N693 406 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 CDYL2Q8N8U2 506 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 OR7G3Q8NG95 312 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 HUS1BQ8NHY5 278 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 YIPF2Q9BWQ6 316 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 DRC3Q9H069 523 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
APTX-227ENST00000485479 HCN3Q9P1Z3 774 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 FIS1Q9Y3D6 152 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 TIMM22Q9Y584 194 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
APTX-227ENST00000485479 KCNE1BA0A087WTH5 132 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ANKDD1BA6NHY2 528 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 RDH16O75452 317 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 JRKO75564 520 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 CLDN9O95484 217 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ETHE1O95571 254 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 CHRNGP07510 517 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ARRB2P32121 409 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 NKAIN1Q4KMZ8 207 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 MANEAQ5SRI9 462 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ARHGAP40Q5TG30 622 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 LIPMQ5VYY2 423 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 GRHL2Q6ISB3 625 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 TMEM214Q6NUQ4 689 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 SCIMPQ6UWF3 145 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 COX15Q7KZN9 410 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 BPHLQ86WA6 291 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ENDOVQ8N8Q3 282 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 CAMKVQ8NCB2 501 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 COL26A1Q96A83 441 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 F2RL3Q96RI0 385 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 EFCAB11Q9BUY7 163 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 CAPS2Q9BXY5 557 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 OR51B5Q9H339 312 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms