RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MC2RQ01718 297 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 BTKQ06187 659 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 FOXM1Q08050 763 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 RGS1Q08116 209 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 HYAL2Q12891 473 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 CSTF3Q12996 717 aaKnown RBP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 HKDC1Q2TB90 917 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 PRTGQ2VWP7 1150 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 RAB11FIP2Q7L804 512 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 GBP7Q8N8V2 638 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 SERPINI1Q99574 410 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 CCT7Q99832 543 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 NLNQ9BYT8 704 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 ACPTQ9BZG2 426 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 SLC6A16Q9GZN6 736 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 PFDN4Q9NQP4 134 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 STARD5Q9NSY2 213 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 USH1CQ9Y6N9 552 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 ADAMTS20P59510 1910 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 FITM1A5D6W6 292 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 GMNCA6NCL1 334 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 LRIT2A6NDA9 550 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 B4E171 279 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 ZNF195O14628 629 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 ZSCAN9O15535 394 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 HYAL3O43820 417 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 OR2B3O76000 313 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 ETHE1O95571 254 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 CCL4P13236 92 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 TSPAN7P41732 249 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 SEC24CP53992 1094 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 ITGA1P56199 1179 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 STXBP1P61764 594 aaKnown RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 EIF3IQ13347 325 aaKnown RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 ADPRMQ3LIE5 342 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 TOR1AIP1Q5JTV8 583 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 DEPDC1Q5TB30 811 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 CYB5D1Q6P9G0 228 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 CHSY3Q70JA7 882 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 MAVSQ7Z434 540 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 BPHLQ86WA6 291 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 GALNT15Q8N3T1 639 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 KCT2Q8NC54 265 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 OR8K5Q8NH50 307 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 F2RL3Q96RI0 385 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 NUF2Q9BZD4 464 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 AICDAQ9GZX7 198 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 KLHL31Q9H511 634 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 FBXO8Q9NRD0 319 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 IRAK4Q9NWZ3 460 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 RARRES3Q9UL19 164 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 SLC12A4Q9UP95 1085 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 RUVBL1Q9Y265 456 aaKnown RBP16.75■□□□□ 0.27
CHMP3-207ENST00000485465 CCL27Q9Y4X3 112 aa16.75■□□□□ 0.27
CHMP3-207ENST00000485465 FAM149AA5PLN7 773 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 TRPC5OSA6NMA1 111 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 RGS14O43566 566 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 SH3BGRLO75368 114 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 FGF5P12034 268 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 ALOX15P16050 662 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-207ENST00000485465 HNRNPH1P31943 449 aaKnown RBP16.74■□□□□ 0.27
CHMP3-207ENST00000485465 HMGCS1Q01581 520 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 CUL3Q13618 768 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 IL11RAQ14626 422 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 GRM7Q14831 915 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 IMPG1Q17R60 797 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 TMEM35AQ53FP2 167 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 XKR7Q5GH72 579 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 KHDRBS2Q5VWX1 349 aaKnown RBP16.74■□□□□ 0.27
CHMP3-207ENST00000485465 CGB2Q6NT52 195 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 Q6ZSR9 355 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 TMPRSS7Q7RTY8 843 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 DGLUCYQ7Z3D6 616 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 GPR135Q8IZ08 494 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 TTC29Q8NA56 475 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-207ENST00000485465 OR2T11Q8NH01 316 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 MS4A6EQ96DS6 147 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 PPP1R36Q96LQ0 422 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 C3orf30Q96M34 536 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 REXO4Q9GZR2 422 aaKnown RBP16.74■□□□□ 0.27
CHMP3-207ENST00000485465 MEAF6Q9HAF1 191 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 APMAPQ9HDC9 416 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 SLC39A1Q9NY26 324 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 VPS29Q9UBQ0 182 aa16.74■□□□□ 0.27
CHMP3-207ENST00000485465 A0A1W2PNU3 283 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 HYKKA2RU49 373 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 URADA6NGE7 173 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 SAP18O00422 153 aaKnown RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 PLD2O14939 933 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 POLR1CO15160 346 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 SHOX2O60902 331 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 DRD4P21917 467 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 EMP3P54852 163 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 PUM1Q14671 1186 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms