RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 A8MUI8 341 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 F10P00742 488 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 AHRP35869 848 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 MEF2AQ02078 507 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 PDAP1Q13442 181 aaKnown RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 USP10Q14694 798 aaKnown RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SFT2D3Q587I9 215 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 HECTD2Q5U5R9 776 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 STEAP4Q687X5 459 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 PAPD4Q6PIY7 484 aaKnown RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 TMEM207Q6UWW9 146 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SYDE1Q6ZW31 735 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 CRLF3Q8IUI8 442 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 IGDCC3Q8IVU1 814 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 BEST3Q8N1M1 668 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 AMER2Q8N7J2 671 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 ANKRD7Q92527 254 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 OR4K3Q96R72 315 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 NPAS2Q99743 824 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 PELI2Q9HAT8 420 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 ARL15Q9NXU5 204 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 ASIC3Q9UHC3 531 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 PRRC2CQ9Y520 2896 aaKnown RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 CACNA1DQ01668 2161 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 PABPN1LA6NDY0 278 aaKnown RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 TTI1O43156 1089 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 OR1F1O43749 312 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 UNC5CO95185 931 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 FHP07954 510 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ALOX12P18054 663 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SCTRP47872 440 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ACTN3Q08043 901 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 CBLBQ13191 982 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 KRTCAP3Q53RY4 240 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 RPTNQ6XPR3 784 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF740Q8NDX6 193 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ITLN2Q8WWU7 325 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ALKBH8Q96BT7 664 aaKnown RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 TBC1D20Q96BZ9 403 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 PEX11GQ96HA9 241 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 LPAR4Q99677 370 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 UTP23Q9BRU9 249 aaKnown RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ZFP69BQ9UJL9 534 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 TEX15Q9BXT5 2789 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ASPDHA6ND91 283 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ZSCAN12O43309 604 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 BANF1O75531 89 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 MLYCDO95822 493 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SMIM10L1P0DMW3 83 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 JAK1P23458 1154 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 CD96P40200 585 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SLC26A5P58743 744 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 RGS1Q08116 209 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 MORF4L2Q15014 288 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 NSDHLQ15738 373 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 BBS9Q3SYG4 887 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF808Q8N4W9 903 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SLC5A8Q8N695 610 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ELP5Q8TE02 316 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 THAP3Q8WTV1 239 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SLC5A11Q8WWX8 675 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 MARVELD3Q96A59 401 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 SMIM10Q96HG1 83 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 RUNDC3BQ96NL0 473 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 DDX47Q9H0S4 455 aaKnown RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 RUBCNLQ9H714 662 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
SCFD1-206ENST00000484733 CNTRLQ7Z7A1 2325 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 TRGV8A0A0C4DH27 118 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 OR2W5A6NFC9 320 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 PRSS44E7EML9 344 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 NDUFS4O43181 175 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 CHST10O43529 356 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.69
SCFD1-206ENST00000484733 OR4D2P58180 307 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 TAS2R50P59544 299 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 CDKL1Q00532 357 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 REEP5Q00765 189 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 CSHL1Q14406 222 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 ABRAXAS2Q15018 415 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 Q6ZPB1 254 aaPredicted RBP10.77□□□□□ -0.69
SCFD1-206ENST00000484733 QSOX2Q6ZRP7 698 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 ABHD13Q7L211 337 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 KLHDC8AQ8IYD2 350 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 PDIK1LQ8N165 341 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 HORMAD2Q8N7B1 307 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 MOCOSQ96EN8 888 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 SIGLEC12Q96PQ1 595 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 OLFM1Q99784 485 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 TEX264Q9Y6I9 313 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 SCN3AQ9NY46 2000 aa10.77□□□□□ -0.69
SCFD1-206ENST00000484733 URADA6NGE7 173 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 CCL21O00585 134 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 CD46P15529 392 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 AGAP20933 346 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 ELK3P41970 407 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 ILF2Q12905 390 aaKnown RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 OR1C1Q15619 314 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms