RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ENO3P13929 434 aaPredicted RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 ABOP16442 354 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 PTGER1P34995 402 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 OR4D2P58180 307 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 SLC26A5P58743 744 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 TIAL1Q01085 375 aaKnown RBP eCLIP13.07□□□□□ -0.32
VARS-226ENST00000483275 RELAQ04206 551 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ACTN3Q08043 901 aaPredicted RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 MAPKAPK3Q16644 382 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.32
VARS-226ENST00000483275 DEFB134Q4QY38 66 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 RBM20Q5T481 1227 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 AGTRAPQ6RW13 159 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 CTAGE6Q86UF2 777 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 CYP4X1Q8N118 509 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 ZNF740Q8NDX6 193 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 MCOLN3Q8TDD5 553 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 AGAP11Q8TF27 550 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 SLC13A3Q8WWT9 602 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ANP32BQ92688 251 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 PYCR2Q96C36 320 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 MTFMTQ96DP5 389 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 TM4SF19Q96DZ7 209 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 SERPINB12Q96P63 405 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 AARSD1Q9BTE6 412 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 SPNS1Q9H2V7 528 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 CDCP1Q9H5V8 836 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 MMP25Q9NPA2 562 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 IARS2Q9NSE4 1012 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 TRMT6Q9UJA5 497 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 FBXO5Q9UKT4 447 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ZNF835Q9Y2P0 537 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 KCNE1BA0A087WTH5 132 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 ASPDHA6ND91 283 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 NDC80O14777 642 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 B4GALT2O60909 372 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 CLDN14O95500 239 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 SP1P08047 785 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 ZNF888P0CJ79 500 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 MYBL2P10244 700 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 CD46P15529 392 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 TPP2P29144 1249 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 MAGEA6P43360 314 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 AGTR2P50052 363 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 SMSP52788 366 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 CDKN2DP55273 166 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 EXT1Q16394 746 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 CAPN13Q6MZZ7 669 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 XKRXQ6PP77 449 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 Q6ZPB1 254 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 SLC5A8Q8N695 610 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 CAMKVQ8NCB2 501 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 M1APQ8TC57 530 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 THAP3Q8WTV1 239 aaPredicted RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
VARS-226ENST00000483275 MS4A14Q96JA4 679 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 LPAR4Q99677 370 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 LRFN1Q9P244 771 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 HCFC1P51610 2035 aa13.06□□□□□ -0.32
VARS-226ENST00000483275 DNAJC13O75165 2243 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 A8MUA0 341 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 MAGEB17A8MXT2 336 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 ASNA1O43681 348 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 OR1F1O43749 312 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 SLC25A12O75746 678 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 FHP07954 510 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 SLC35G6P0C7Q6 338 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 ZNF24P17028 368 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 MAOAP21397 527 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 HNF4AP41235 474 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 NR0B1P51843 470 aaKnown RBP13.05□□□□□ -0.32
VARS-226ENST00000483275 BTG2P78543 158 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 SARNPP82979 210 aaKnown RBP13.05□□□□□ -0.32
VARS-226ENST00000483275 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
VARS-226ENST00000483275 PAQR3Q6TCH7 311 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 ZNF227Q86WZ6 799 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 TMEM178AQ8NBL3 297 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 LINGO1Q96FE5 620 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 SGPP1Q9BX95 441 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 KLHL42Q9P2K6 505 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 EML6Q6ZMW3 1958 aa13.05□□□□□ -0.32
VARS-226ENST00000483275 C4orf51C9J302 202 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 ADAM10O14672 748 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 CHST10O43529 356 aa13.04□□□□□ -0.32
VARS-226ENST00000483275 NME2P1O60361 137 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms