RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 NIPAL4Q0D2K0 466 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 ILF3Q12906 894 aaKnown RBP eCLIP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 LINC00303Q3SY05 128 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 PYCR3Q53H96 274 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 RAET1GQ6H3X3 334 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 FBXO42Q6P3S6 717 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 ALKBH5Q6P6C2 394 aaKnown RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 SLC30A9Q6PML9 568 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 BCDIN3DQ7Z5W3 292 aaKnown RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 ZFAND4Q86XD8 727 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 LRRC49Q8IUZ0 686 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 NRSN1Q8IZ57 195 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 BBS5Q8N3I7 341 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 PQLC3Q8N755 202 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 PAF1Q8N7H5 531 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 EXD3Q8N9H8 876 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 ARRDC2Q8TBH0 407 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 KIAA1524Q8TCG1 905 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 TMEM159Q96B96 161 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 FAF2Q96CS3 445 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 AP2M1Q96CW1 435 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 DAZAP1Q96EP5 407 aaKnown RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 MED8Q96G25 268 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 COX14Q96I36 57 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 TSGA13Q96PP4 275 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 CMKLR1Q99788 373 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 ZNF670Q9BS34 389 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 GSDMCQ9BYG8 508 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 POLR1EQ9GZS1 481 aaKnown RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 SUDS3Q9H7L9 328 aaPredicted RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 SAP30LQ9HAJ7 183 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 TMEM9Q9P0T7 183 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 CD84Q9UIB8 345 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 MOSPD1Q9UJG1 213 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 CHKBQ9Y259 395 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 TMEM98Q9Y2Y6 226 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 BZW2Q9Y6E2 419 aaKnown RBP4.85□□□□□ -1.63
PRKCB-206ENST00000482000 DOPEY2Q9Y3R5 2298 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 NBASA2RRP1 2371 aa4.85□□□□□ -1.63
PRKCB-206ENST00000482000 MED13Q9UHV7 2174 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 SNRNP200O75643 2136 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 IGHV1OR21-1A0A087WYE8 117 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 GXYLT2A0PJZ3 443 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 A6NCN8 305 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 LRRC3CA6NJW4 275 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 C3orf70A6NLC5 250 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 H7C1Q1 480 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 INPP4BO15327 924 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 PROSCO94903 275 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CLDN7O95471 211 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 NUDT3O95989 172 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 TMIGD3P0DMS9 266 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 FGF3P11487 239 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CCNCP24863 283 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 NFKBIAP25963 317 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ALDH4A1P30038 563 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 HNRNPH3P31942 346 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 GJC1P36383 396 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ACTR1BP42025 376 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 GPR1P46091 355 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 FASLGP48023 281 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 SPINT3P49223 89 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 LIMK2P53671 638 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ELLP55199 621 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 UBASH3AP57075 661 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ACTR1AP61163 376 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ZBTB17Q13105 803 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CSHL1Q14406 222 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 KRT81Q14533 505 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 PDCD2Q16342 344 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CLPPQ16740 277 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ASTE1Q2TB18 679 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ANKRD20A8PQ5CZ79 823 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CCDC122Q5T0U0 273 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 FAM182AQ5T1J6 154 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 HENMT1Q5T8I9 393 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 NKAIN2Q5VXU1 208 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 MARK2Q7KZI7 788 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 VASH2Q86V25 355 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 PIM3Q86V86 326 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 SFRP1Q8N474 314 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 NKAPQ8N5F7 415 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 BMPERQ8N8U9 685 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 FAM71DQ8N9W8 422 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 OR4D9Q8NGE8 314 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 EXD1Q8NHP7 514 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 ZNF564Q8TBZ8 553 aaPredicted RBP4.84□□□□□ -1.63
PRKCB-206ENST00000482000 STT3BQ8TCJ2 826 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 NSMCE1Q8WV22 266 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 HTR3CQ8WXA8 447 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 RAPGEF5Q92565 580 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 HDAC11Q96DB2 347 aa4.84□□□□□ -1.63
PRKCB-206ENST00000482000 OR2M4Q96R27 311 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms