RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF324BQ6AW86 544 aaPredicted RBP17.5■□□□□ 0.39
CLK1-211ENST00000481641 SBSNQ6UWP8 590 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 SYDE1Q6ZW31 735 aaPredicted RBP17.5■□□□□ 0.39
CLK1-211ENST00000481641 CTAGE6Q86UF2 777 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 OR4K1Q8NGD4 311 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 TSLPQ969D9 159 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 NEIL2Q969S2 332 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 SLC22A7Q9Y694 548 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 TRBC2A0A5B9 178 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 NPEPPSL1A6NEC2 478 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 PIAS1O75925 651 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 SEC31AO94979 1220 aaKnown RBP17.49■□□□□ 0.39
CLK1-211ENST00000481641 TDGF1P3P51864 188 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 RHAGQ02094 409 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 PDIA2Q13087 525 aaKnown RBP17.49■□□□□ 0.39
CLK1-211ENST00000481641 CRYBG3Q68DQ2 2970 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 PLAG1Q6DJT9 500 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 AFAP1L2Q8N4X5 818 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 FBXO36Q8NEA4 188 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 SLC5A11Q8WWX8 675 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 LRRC39Q96DD0 335 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 LANCL2Q9NS86 450 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 ZFATQ9P243 1243 aa17.49■□□□□ 0.39
CLK1-211ENST00000481641 C19orf25Q9UFG5 118 aaPredicted RBP17.49■□□□□ 0.39
CLK1-211ENST00000481641 CORO1CQ9ULV4 474 aaPredicted RBP17.49■□□□□ 0.39
CLK1-211ENST00000481641 ITPR2Q14571 2701 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 OR5H15A6NDH6 313 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 MAN1A2O60476 641 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 ZNF888P0CJ79 500 aaPredicted RBP17.48■□□□□ 0.39
CLK1-211ENST00000481641 ZNF37AP17032 561 aaPredicted RBP17.48■□□□□ 0.39
CLK1-211ENST00000481641 DCTP40126 519 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 MGAT5Q09328 741 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 CSHL1Q14406 222 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 ABRAXAS2Q15018 415 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 PPP1R3AQ16821 1122 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 DEFB134Q4QY38 66 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 SFT2D3Q587I9 215 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 C1QL3Q5VWW1 255 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 CAPN12Q6ZSI9 719 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 STRA8Q7Z7C7 330 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 ZC3HC1Q86WB0 502 aaKnown RBP17.48■□□□□ 0.39
CLK1-211ENST00000481641 ATL1Q8WXF7 558 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 NR4A3Q92570 626 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 PDLIM5Q96HC4 596 aaKnown RBP17.48■□□□□ 0.39
CLK1-211ENST00000481641 NPAS2Q99743 824 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 NAPGQ99747 312 aaPredicted RBP17.48■□□□□ 0.39
CLK1-211ENST00000481641 SARGQ9BW04 601 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 RNF32Q9H0A6 362 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 KCNK13Q9HB14 408 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 SNX24Q9Y343 169 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 SAR1BQ9Y6B6 198 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 CELSR2Q9HCU4 2923 aa17.48■□□□□ 0.39
CLK1-211ENST00000481641 MYO7BQ6PIF6 2116 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 FAM95CA0A1B0GW59 222 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 FANCGO15287 622 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 CHST10O43529 356 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 GALR3O60755 368 aaPredicted RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 WISP2O76076 250 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 CYC1P08574 325 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 ENO2P09104 434 aaPredicted RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 ALOX12P18054 663 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 MST1P26927 711 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 HNF4AP41235 474 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 RPL21P46778 160 aaKnown RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 SCTRP47872 440 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 AGTR2P50052 363 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 TAS2R39P59534 338 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 AP2B1P63010 937 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 PMP22Q01453 160 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 ACTN3Q08043 901 aaPredicted RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 FRG1Q14331 258 aaKnown RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 HERC3Q15034 1050 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 NSDHLQ15738 373 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 C18orf21Q32NC0 220 aaPredicted RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 ACER2Q5QJU3 275 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 PAPD4Q6PIY7 484 aaKnown RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 FJX1Q86VR8 437 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 THOC6Q86W42 341 aaKnown RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 CRLF3Q8IUI8 442 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 BEST3Q8N1M1 668 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 ANKRD53Q8N9V6 530 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 PLPP5Q8NEB5 264 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 ANKRD49Q8WVL7 239 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 KRT12Q99456 494 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 FAM129AQ9BZQ8 928 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
CLK1-211ENST00000481641 ANKRD10Q9NXR5 420 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 PYCARDQ9ULZ3 195 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 SLC22A14Q9Y267 594 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 DYRK1BQ9Y463 629 aa17.47■□□□□ 0.39
CLK1-211ENST00000481641 PRAMEF2O60811 474 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 ZG16O60844 167 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 B4GALT2O60909 372 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 RASAL1O95294 804 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 FHP07954 510 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 STSP08842 583 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 RAB8AP61006 207 aa17.46■□□□□ 0.39
CLK1-211ENST00000481641 REEP5Q00765 189 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms