RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CPSF3Q9UKF6 684 aaKnown RBP3.25□□□□□ -1.89
COPA-204ENST00000481522 MRPS28Q9Y2Q9 187 aaKnown RBP3.25□□□□□ -1.89
COPA-204ENST00000481522 MTCH2Q9Y6C9 303 aa3.25□□□□□ -1.89
COPA-204ENST00000481522 CENPEQ02224 2701 aa3.25□□□□□ -1.89
COPA-204ENST00000481522 LAMB1P07942 1786 aa3.25□□□□□ -1.89
COPA-204ENST00000481522 CSPG4Q6UVK1 2322 aa3.25□□□□□ -1.89
COPA-204ENST00000481522 CPDO75976 1380 aa3.25□□□□□ -1.89
COPA-204ENST00000481522 ANKRD31Q8N7Z5 1873 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 A0A1W2PPM1 405 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 A0A1W2PPQ1 181 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 ANTXRLA6NF34 631 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 NEMP2A6NFY4 417 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 SLCO1B7G3V0H7 640 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 TRIM77I1YAP6 450 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 KLF11O14901 512 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 TADA2AO75478 443 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 C22orf31O95567 290 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 IGHV2-70P01814 119 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 DNTTP04053 509 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 HSP90AA1P07900 732 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 FAM157CP0CG43 387 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 SMIM18P0DKX4 95 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 HAPLN1P10915 354 aaPredicted RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 CEACAM1P13688 526 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 CDH3P22223 829 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 EEF1B2P24534 225 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 MPZP25189 248 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 EEF1DP29692 281 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 MC5RP33032 325 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 MAGEA11P43364 429 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 TAF6P49848 677 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 ASCL1P50553 236 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 RAB28P51157 221 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 MAPK12P53778 367 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 MAT1AQ00266 395 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 ZNF415Q09FC8 603 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 KYNUQ16719 465 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 VWC2Q2TAL6 325 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 ZFP69Q49AA0 526 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 TCP11X2Q5H9J9 407 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 CYP4A22Q5TCH4 519 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 C20orf194Q5TEA3 1177 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 BSPRYQ5W0U4 402 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 CST9LP1Q5W188 147 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 RTN4RL2Q86UN3 420 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 MAML2Q8IZL2 1156 aaPredicted RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 TMEM105Q8N8V8 129 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 KBTBD8Q8NFY9 601 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 OR52N5Q8NH56 324 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 TAF15Q92804 592 aaKnown RBP eCLIP3.24□□□□□ -1.89
COPA-204ENST00000481522 MOB3AQ96BX8 217 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 THOC1Q96FV9 657 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 CFAP57Q96MR6 1250 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 WDR13Q9H1Z4 485 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 RABEP2Q9H5N1 569 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 C11orf49Q9H6J7 331 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 MYNNQ9NPC7 610 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 ZNF71Q9NQZ8 489 aaPredicted RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 INTS9Q9NV88 658 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 CLIC5Q9NZA1 410 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 RPS6KL1Q9Y6S9 549 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 CEP162Q5TB80 1403 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 ANKRD36BQ8N2N9 1353 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 USP47Q96K76 1375 aa3.24□□□□□ -1.89
COPA-204ENST00000481522 FAM208AQ9UK61 1670 aaKnown RBP3.24□□□□□ -1.89
COPA-204ENST00000481522 TP53BP1Q12888 1972 aaPredicted RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 NR5A2O00482 541 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 UBE2CO00762 179 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 PLOD3O60568 738 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 CDC123O75794 336 aaPredicted RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 DFFBO76075 338 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 GGPS1O95749 300 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 IGHV4-31P0DP07 118 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 JAK1P23458 1154 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 MAZP56270 477 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 CUL3Q13618 768 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 TEAD2Q15562 447 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 CA9Q16790 459 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 SPDYCQ5MJ68 293 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 RBPMS2Q6ZRY4 209 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 ZBTB49Q6ZSB9 765 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 NUP54Q7Z3B4 507 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 PIGZQ86VD9 579 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 EID3Q8N140 333 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 ZNF611Q8N823 705 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 NIPA2Q8N8Q9 360 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 TDRD5Q8NAT2 981 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 XXYLT1Q8NBI6 393 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 TMEM178AQ8NBL3 297 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 SLC4A11Q8NBS3 891 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 ZNF485Q8NCK3 441 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 SNRNP27Q8WVK2 155 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 HPSE2Q8WWQ2 592 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 CNDP2Q96KP4 475 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 LINC00615Q96LM1 132 aaPredicted RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 FGF22Q9HCT0 170 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 WDR35Q9P2L0 1181 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 TMED3Q9Y3Q3 217 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms