RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RDH16O75452 317 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 TTC4O95801 387 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 CDH1P12830 882 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 PGAM1P18669 254 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 JAK1P23458 1154 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 EEF1DP29692 281 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 COILP38432 576 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 CD96P40200 585 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 CCR8P51685 355 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 TERF1P54274 439 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 AP1S2P56377 157 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 TAS2R50P59544 299 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 PMP22Q01453 160 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 MEF2AQ02078 507 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 DHX9Q08211 1270 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 OR1C1Q15619 314 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 NSDHLQ15738 373 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 SFT2D3Q587I9 215 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 PAPD4Q6PIY7 484 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 SLC26A11Q86WA9 606 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 FAM98AQ8NCA5 519 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 ZCCHC10Q8TBK6 192 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 EEF1AKMT1Q8WVE0 214 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 MAGED4Q96JG8 741 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 PBKQ96KB5 322 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 FRMD6Q96NE9 622 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 CLK4Q9HAZ1 481 aaKnown RBP12.22□□□□□ -0.45
ABCF3-212ENST00000478288 ADAMTS6Q9UKP5 1117 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 SH2B3Q9UQQ2 575 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 NAALAD2Q9Y3Q0 740 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 JRKLQ9Y4A0 524 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 ZNF407Q9C0G0 2248 aa12.22□□□□□ -0.45
ABCF3-212ENST00000478288 MED13LQ71F56 2210 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 TRBC2A0A5B9 178 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 FEZF1A0PJY2 475 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 GOLGA8MH3BSY2 632 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 GALR3O60755 368 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 NEURL1O76050 574 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 STATHP02808 62 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 FHP07954 510 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 F7P08709 466 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 HIST1H2AGP0C0S8 130 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 COX6B1P14854 86 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 NPPBP16860 134 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 HIST1H2ADP20671 130 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 AHRP35869 848 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 FNTAP49354 379 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 SMSP52788 366 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 SLC26A5P58743 744 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 ADORA2A-AS1P86434 159 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 NAE1Q13564 534 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 CRYMQ14894 314 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 PHKG1Q16816 387 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 KCTD19Q17RG1 926 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 DUPD1Q68J44 220 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 MBOAT1Q6ZNC8 495 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 SPPL2CQ8IUH8 684 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 SIAH3Q8IW03 269 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 PPIL6Q8IXY8 311 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 SHISA5Q8N114 240 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 ARMC10Q8N2F6 343 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 TBC1D19Q8N5T2 526 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 OR56A3Q8NH54 315 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 NT5CQ8TCD5 201 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 GRK7Q8WTQ7 553 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 TBC1D20Q96BZ9 403 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 HIST1H2AHQ96KK5 128 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 HIST1H2AJQ99878 128 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 MACROD1Q9BQ69 325 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 NAT9Q9BTE0 207 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 H2AFJQ9BTM1 129 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 ATG10Q9H0Y0 220 aa12.21□□□□□ -0.45
ABCF3-212ENST00000478288 TRIM45Q9H8W5 580 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.45
ABCF3-212ENST00000478288 OR2W5A6NFC9 320 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 GABRR3A8MPY1 467 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 PGRMC1O00264 195 aaKnown RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 NDUFS4O43181 175 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 TSPAN12O95859 305 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ENO2P09104 434 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ESRRAP11474 423 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ALOX12P18054 663 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ALDH6A1Q02252 535 aaKnown RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ACTN3Q08043 901 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 C3AR1Q16581 482 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 ZXDCQ2QGD7 858 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 RNASEH2BQ5TBB1 312 aaKnown RBP12.2□□□□□ -0.46
ABCF3-212ENST00000478288 FCRLBQ6BAA4 426 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 SPINK14Q6IE38 97 aa12.2□□□□□ -0.46
ABCF3-212ENST00000478288 PAQR3Q6TCH7 311 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms