RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 NUMBP49757 651 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 TUBP50607 506 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 EIF3EP60228 445 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ESRRGP62508 458 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 TUBA1BP68363 451 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SLC25A11Q02978 314 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 BST1Q10588 318 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 OVGP1Q12889 678 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 TRAP1Q12931 704 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 MAPRE2Q15555 327 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF718Q3SXZ3 478 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 KBTBD12Q3ZCT8 623 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 DUSP28Q4G0W2 176 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 C10orf62Q5T681 223 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ATG9BQ674R7 924 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SLC39A4Q6P5W5 647 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 UGT2A3Q6UWM9 527 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 C17orf99Q6UX52 265 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 FRA10AC1Q70Z53 315 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PSTKQ8IV42 348 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 CDKL3Q8IVW4 592 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ARID3BQ8IVW6 561 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ZBTB8OSQ8IWT0 167 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 CPSF7Q8N684 471 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PACRGLQ8N7B6 248 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 TEX45Q8NA69 505 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 OR6J1Q8NGC5 347 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF420Q8TAQ5 688 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PNPT1Q8TCS8 783 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 HM13Q8TCT9 377 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 DTX3LQ8TDB6 740 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ADAMTS16Q8TE57 1224 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 GDPD5Q8WTR4 605 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PDCD6IPQ8WUM4 868 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PRPF31Q8WWY3 499 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 POP5Q969H6 163 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 FAF2Q96CS3 445 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 DUS3LQ96G46 650 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 EBNA1BP2Q99848 306 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 FAM213AQ9BRX8 229 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 HERPUD2Q9BSE4 406 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 OSBPL11Q9BXB4 747 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 DRC3Q9H069 523 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 CYP3A43Q9HB55 503 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PLGRKTQ9HBL7 147 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 FBXO6Q9NRD1 293 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 DNAJC17Q9NVM6 304 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 GIN1Q9NXP7 522 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 UTP6Q9NYH9 597 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 ERAP1Q9NZ08 941 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 UBAP1Q9NZ09 502 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 RCOR3Q9P2K3 495 aaPredicted RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SLC17A7Q9P2U7 560 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 PAIP2BQ9ULR5 123 aaKnown RBP4.43□□□□□ -1.7
LMBR1-216ENST00000477983 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SH3GLB1Q9Y371 365 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 SIP14410 1827 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 MCM3APO60318 1980 aa4.43□□□□□ -1.7
LMBR1-216ENST00000477983 IGLV5-52A0A0A0MRZ9 124 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 FAM237BA0A1B0GVD1 139 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ERI2A8K979 691 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 E9PBE3 544 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 F8VP50 259 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TNPO2O14787 897 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 KCNJ13O60928 360 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RNASEH1O60930 286 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PEX14O75381 377 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TRMUO75648 421 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 STAMBPO95630 424 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TRUB2O95900 331 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SNRNP70P08621 437 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CD48P09326 243 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 UBTFL6P0CB48 400 aaPredicted RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZCCHC18P0CG32 403 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ARSAP15289 507 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF23P17027 643 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CST5P28325 142 aaPredicted RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SERPINB6P35237 376 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 DPP6P42658 865 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RANBP1P43487 201 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SLC1A6P48664 564 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SLC26A2P50443 739 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CDK9P50750 372 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CLCN3P51790 818 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ADARP55265 1226 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 YWHAGP61981 247 aaKnown RBP eCLIP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RPL7AP62424 266 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 BASP1P80723 227 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 HPCAP84074 193 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ARHGAP8P85298 464 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PDE1BQ01064 536 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PPARDQ03181 441 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 KDSRQ06136 332 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 LAMTOR4Q0VGL1 99 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ILF3Q12906 894 aaKnown RBP eCLIP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CAPSQ13938 189 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms