RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 RNFT1Q5M7Z0 435 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 FBXW10Q5XX13 1052 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 H3F3CQ6NXT2 135 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 ASPGQ86U10 573 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC26A11Q86WA9 606 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 CCDC71Q8IV32 467 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 SIAH3Q8IW03 269 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 REXO1L1PQ8IX06 675 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 SYCE1Q8N0S2 351 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 TMEM156Q8N614 296 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 CAMKVQ8NCB2 501 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 FBXO15Q8NCQ5 510 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 CHDHQ8NE62 594 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 OR5T3Q8NGG3 340 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 SREK1Q8WXA9 508 aaKnown RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 LPGAT1Q92604 370 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 RND1Q92730 232 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 PEX13Q92968 403 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 MFSD3Q96ES6 412 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 CCDC138Q96M89 665 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 PWWP2AQ96N64 755 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 BIRC8Q96P09 236 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 PANX2Q96RD6 677 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 DEFB126Q9BYW3 111 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 IL22Q9GZX6 179 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 DEFB127Q9H1M4 99 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 RHBGQ9H310 441 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 TP63Q9H3D4 680 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 CCM2LQ9NUG4 571 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 TMEM184CQ9NVA4 438 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 SYBUQ9NX95 663 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 DNAJB12Q9NXW2 375 aaKnown RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 PAK5Q9P286 719 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 ERVK-11Q9UQG0 969 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 KLF13Q9Y2Y9 288 aaPredicted RBP6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 DNAJC13O75165 2243 aa6.27□□□□□ -1.41
RTFDC1-206ENST00000477485 FAM166BA8MTA8 275 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 MAGEB17A8MXT2 336 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NPIPA2E9PIF3 369 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NPIPA3F8WFD2 350 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PSMD12O00232 456 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC16A5O15375 505 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NDUFS4O43181 175 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PEX1O43933 1283 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 B3GALT4O96024 378 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 CYC1P08574 325 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PAMP19021 973 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TFEBP19484 476 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 KLK2P20151 261 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 JAK1P23458 1154 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 MSX1P28360 303 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 IMPA1P29218 277 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 HNF4AP41235 474 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NPY2RP49146 381 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SKP1P63208 163 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 RHAGQ02094 409 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 THOC5Q13769 683 aaKnown RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 KCTD19Q17RG1 926 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TYSND1Q2T9J0 566 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 DEFB134Q4QY38 66 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF470Q6ECI4 717 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 CAPN13Q6MZZ7 669 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TMEM214Q6NUQ4 689 aaKnown RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF585AQ6P3V2 769 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 UBE2R2Q712K3 238 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PIWIL4Q7Z3Z4 852 aaKnown RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 VN1R4Q7Z5H5 301 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 C17orf64Q86WR6 236 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PDSS2Q86YH6 399 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SPNS2Q8IVW8 549 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SULF2Q8IWU5 870 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PALM2Q8IXS6 379 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 ZZZ3Q8IYH5 903 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 CPNE9Q8IYJ1 553 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 CLYBLQ8N0X4 340 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 CYP4Z2PQ8N1L4 340 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 RPRMLQ8N4K4 120 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 MARVELD2Q8N4S9 558 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 ARHGEF39Q8N4T4 335 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PRELID2Q8N945 189 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 LRRC57Q8N9N7 239 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 POGLUT1Q8NBL1 392 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 OR5M9Q8NGP3 310 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC13A3Q8WWT9 602 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 PTCHD1Q96NR3 888 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 OLFM1Q99784 485 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 POLDIP3Q9BY77 421 aaKnown RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC6A16Q9GZN6 736 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 LACRTQ9GZZ8 138 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 ATG10Q9H0Y0 220 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 NPDC1Q9NQX5 325 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 FBXO6Q9NRD1 293 aaPredicted RBP6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TREX1Q9NSU2 369 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 SAMD15Q9P1V8 674 aa6.26□□□□□ -1.41
RTFDC1-206ENST00000477485 TNFRSF10DQ9UBN6 386 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms