RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MLKLQ8NB16 471 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 RBM15BQ8NDT2 890 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 ACCSQ96QU6 501 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SLC22A12Q96S37 553 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SMC6Q96SB8 1091 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 ATOH8Q96SQ7 321 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SEMA3CQ99985 751 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 PSD2Q9BQI7 771 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 TRPV6Q9H1D0 765 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 TMEM206Q9H813 350 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 OLFML3Q9NRN5 406 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 HAUS2Q9NVX0 235 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 PTTG2Q9NZH5 202 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 GPR34Q9UPC5 381 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MRPS28Q9Y2Q9 187 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 TRPV2Q9Y5S1 764 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 GRIN2DO15399 1336 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 GOLGA6L19H0YKK7 550 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PDXKO00764 312 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PAPSS1O43252 624 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 ZNF217O75362 1048 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 RPS6KA5O75582 802 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PDE9AO76083 593 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 IGLV1-44P01699 117 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 NR3C1P04150 777 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 TPM2P07951 284 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PRLRP16471 622 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 CCNE1P24864 410 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 HOXC8P31273 242 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 AHRP35869 848 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 LIG4P49917 911 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 CRYBB1P53674 252 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 MLLT10P55197 1068 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 STX17P56962 302 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PTENP60484 403 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 GTF2BQ00403 316 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 LRRC63Q05C16 580 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 STK4Q13043 487 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 DRP2Q13474 957 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PRPF4BQ13523 1007 aaKnown RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 KNOP1Q1ED39 458 aaKnown RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 ZC2HC1CQ53FD0 456 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 CFAP161Q6P656 301 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 ZNF720Q7Z2F6 126 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 RPAINQ86UA6 219 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 GTSCR1Q86UQ5 136 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 CREBRFQ8IUR6 639 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 CEP97Q8IW35 865 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 FAM114A1Q8IWE2 563 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 NELFCDQ8IXH7 590 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 DAW1Q8N136 415 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 GUF1Q8N442 669 aaKnown RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 KIAA0895Q8NCT3 520 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 ANKRD20A12PQ8NF67 263 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 GOLGA5Q8TBA6 731 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 NELFBQ8WX92 580 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 ZNF653Q96CK0 615 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 SENP5Q96HI0 755 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 DHTKD1Q96HY7 919 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 ABHD8Q96I13 439 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 ADPGKQ9BRR6 497 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 TCHPQ9BT92 498 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 KIFC3Q9BVG8 833 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 CCDC68Q9H2F9 335 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 ST6GALNAC4Q9H4F1 302 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 TRPC7Q9HCX4 862 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 PRMT7Q9NVM4 692 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 WSB2Q9NYS7 404 aaPredicted RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 CGNQ9P2M7 1197 aaKnown RBP3.69□□□□□ -1.82
UBR3-209ENST00000477461 TBC1D29Q9UFV1 150 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 AMACRQ9UHK6 382 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 SIP14410 1827 aa3.69□□□□□ -1.82
UBR3-209ENST00000477461 OR2A25A4D2G3 310 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 LRRC72A6NJI9 287 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CETN3O15182 167 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CLIC2O15247 247 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 CLDN3O15551 220 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SYNCRIPO60506 623 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 CSDE1O75534 798 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 SORBS2O94875 1100 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 KCNK5O95279 499 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 GHRP10912 638 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 EPB41P11171 864 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 KRT13P13646 458 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 DARSP14868 501 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 ZNF26P17031 533 aaPredicted RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 AXLP30530 894 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SLC15A1P46059 708 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 PNLIPRP2P54317 469 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 MFAP4P55083 255 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 SNRPFP62306 86 aaKnown RBP3.68□□□□□ -1.82
UBR3-209ENST00000477461 MYL5Q02045 173 aa3.68□□□□□ -1.82
UBR3-209ENST00000477461 MBTD1Q05BQ5 628 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms