RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IFNA16P05015 189 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 IL3P08700 152 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 JUPP14923 745 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 AMD1P17707 334 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 AVPR1BP47901 424 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 RNF144AP50876 292 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 NCBP2P52298 156 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PTSQ03393 145 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FPGSQ05932 587 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF763Q0D2J5 394 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 LASP1Q14847 261 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SPIN4Q56A73 249 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FAM26DQ5JW98 314 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 BHLHB9Q6PI77 547 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ZZZ3Q8IYH5 903 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CYP4Z2PQ8N1L4 340 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CELF5Q8N6W0 485 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FAM86B1Q8N7N1 296 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 OR7G3Q8NG95 312 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 BADQ92934 168 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SORBS1Q9BX66 1292 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SLC12A9Q9BXP2 914 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SEZ6LQ9BYH1 1024 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ANKRD60Q9BZ19 345 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 MAT2BQ9NZL9 334 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TMED5Q9Y3A6 229 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 OR1A2Q9Y585 309 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ST14Q9Y5Y6 855 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 A0A096LPI6 279 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 GMFGO60234 142 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CACNG3O60359 315 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ABCB7O75027 752 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TMCC2O75069 709 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FGF19O95750 216 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 NUDT14O95848 222 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CH25HO95992 272 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CTSAP10619 480 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 DCTP40126 519 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 RGS8P57771 180 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 DSTNP60981 165 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 LRRC32Q14392 662 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FAM20CQ8IXL6 584 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FAR1Q8WVX9 515 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 HPS1Q92902 700 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 NAA50Q9GZZ1 169 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 DPEP2Q9H4A9 486 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 KAT8Q9H7Z6 458 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 CDV3Q9UKY7 258 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 BTBD3Q9Y2F9 522 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PCNTO95613 3336 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 POM121CA8CG34 1229 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 M0R129 80 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 PDE9AO76083 593 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 GRIA2P42262 883 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 RAPSNQ13702 412 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 TAB1Q15750 504 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 TIGD6Q17RP2 521 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 FOCADQ5VW36 1801 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ATG9BQ674R7 924 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 MACC1Q6ZN28 852 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF551Q7Z340 670 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 LRRTM4Q86VH4 590 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 NAGSQ8N159 534 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 AQP11Q8NBQ7 271 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 OR4E2Q8NGC2 313 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 NEIL2Q969S2 332 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ZBED6CLQ96FA7 236 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF514Q96K75 400 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 PKMYT1Q99640 499 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 MACROD1Q9BQ69 325 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 FBXL12Q9NXK8 326 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 RPS6KB2Q9UBS0 482 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 A0A0J9YVX5 310 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 NR2F6P10588 404 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 TMEM151AQ8N4L1 468 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 KBTBD8Q8NFY9 601 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 TEX47Q8TBZ9 253 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ZFAND2BQ8WV99 257 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 FEVQ99581 238 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 PRRG3Q9BZD7 231 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 STOX2Q9P2F5 926 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 PTBP2Q9UKA9 531 aaKnown RBP10.63□□□□□ -0.71
COL27A1-204ENST00000477421 CLEC4AQ9UMR7 237 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 PCDHGA8Q9Y5G5 932 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 CABIN1Q9Y6J0 2220 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 A0A1W2PP55 124 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 IGLON5A6NGN9 336 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 GNB5O14775 395 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 NDUFS4O43181 175 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 INMTO95050 263 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 SNX4O95219 450 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 C6P13671 934 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 SLC5A2P31639 672 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 ERVK-21P61565 698 aa10.63□□□□□ -0.71
COL27A1-204ENST00000477421 RPP38P78345 283 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms