RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PANK3Q9H999 370 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 PANK4Q9NVE7 773 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 ASIC5Q9NY37 505 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 CNOT2Q9NZN8 540 aaKnown RBP6.51□□□□□ -1.37
LRCH3-215ENST00000476664 C6orf203Q9P0P8 240 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-215ENST00000476664 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 TESQ9UGI8 421 aaKnown RBP6.51□□□□□ -1.37
LRCH3-215ENST00000476664 TTC7AQ9ULT0 858 aaPredicted RBP6.51□□□□□ -1.37
LRCH3-215ENST00000476664 ZFR2Q9UPR6 939 aaKnown RBP6.51□□□□□ -1.37
LRCH3-215ENST00000476664 RAP2CQ9Y3L5 183 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 MYO10Q9HD67 2058 aa6.51□□□□□ -1.37
LRCH3-215ENST00000476664 WDR19Q8NEZ3 1342 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ABCA12Q86UK0 2595 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ANKDD1BA6NHY2 528 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 M0QX08 132 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 SLC28A1O00337 649 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CNMDO75829 334 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CIB2O75838 187 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 GDF11O95390 407 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 C1QTNF9P0C862 333 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CBSLP0DN79 551 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CBSP35520 551 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FOLR3P41439 243 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FMO5P49326 533 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 MAPK12P53778 367 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 UBE2HP62256 183 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 TNFRSF17Q02223 184 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 HSF2Q03933 536 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FAM27E3Q08E93 113 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PMPCAQ10713 525 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PKP1Q13835 747 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ACKR1Q16570 336 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CFAP221Q4G0U5 840 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 MCMDC2Q4G0Z9 681 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 DCST1Q5T197 706 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PRAMEF7Q5VXH5 474 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 DEFB128Q7Z7B8 93 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 LUZP1Q86V48 1076 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 MEX3DQ86XN8 651 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 MISPQ8IVT2 679 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 RYBPQ8N488 228 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 EMC1Q8N766 993 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CMASQ8NFW8 434 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 DQX1Q8TE96 717 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FCGR1BQ92637 280 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 APBB2Q92870 758 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FAM46BQ96A09 425 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PIWIL1Q96J94 861 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FCRL5Q96RD9 977 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CAPS2Q9BXY5 557 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 VCX2Q9H322 139 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 DPAGT1Q9H3H5 408 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FANCEQ9HB96 536 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 HOMER3Q9NSC5 361 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 FAM207AQ9NSI2 230 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 RAB20Q9NX57 234 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 GDAP2Q9NXN4 497 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 TXNDC16Q9P2K2 825 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PLEKHB1Q9UF11 243 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 PSME2Q9UL46 239 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ZNF510Q9Y2H8 683 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CHTOPQ9Y3Y2 248 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 TET1Q8NFU7 2136 aa6.5□□□□□ -1.37
LRCH3-215ENST00000476664 ZNFX1Q9P2E3 1918 aaKnown RBP6.5□□□□□ -1.37
LRCH3-215ENST00000476664 CFAP46Q8IYW2 2715 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 DPPA5A6NC42 116 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 NEMP2A6NFY4 417 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 J3QR06 171 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 RRHO14718 337 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 SURF6O75683 361 aaKnown RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 SPDEFO95238 335 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 TOP3BO95985 862 aaKnown RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 GAS8O95995 478 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 EPCAMP16422 314 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 HRH2P25021 359 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 ELAVL4P26378 380 aaKnown RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 TACR3P29371 465 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 MMP13P45452 471 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 TP53BP2Q13625 1128 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 CARTPTQ16568 116 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 PDK4Q16654 411 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 SYT16Q17RD7 645 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 USH1GQ495M9 461 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 TDRD12Q587J7 1177 aaKnown RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 LDLRAP1Q5SW96 308 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 CDC42EP5Q6NZY7 148 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 PRSS55Q6UWB4 352 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 TMCO2Q7Z6W1 182 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 ASPGQ86U10 573 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 ZC3HC1Q86WB0 502 aaKnown RBP6.49□□□□□ -1.37
LRCH3-215ENST00000476664 AMIGO1Q86WK6 493 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 NUDT13Q86X67 352 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 ZDHHC21Q8IVQ6 265 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 LINC01356Q8N9X3 169 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 FAM184AQ8NB25 1140 aa6.49□□□□□ -1.37
LRCH3-215ENST00000476664 BBOF1Q8ND07 529 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms