RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IGKV1-8A0A0C4DH67 115 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SAP18O00422 153 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NR5A2O00482 541 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ANGPT2O15123 496 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ERI3O43414 337 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC22A3O75751 556 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ANXA4P09525 319 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 THRAP10827 490 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 MYF5P13349 255 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ACPPP15309 386 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ST6GAL1P15907 406 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CALB2P22676 271 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TIA1P31483 386 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■■□□ 17.7
PRPF38A-202ENST00000474048 GSTM5P46439 218 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SEPHS1P49903 392 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 MAPK12P53778 367 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 GFERP55789 205 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NME5P56597 212 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 VSX2P58304 361 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 YBX1P67809 324 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 HSD11B2P80365 405 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ZNF763Q0D2J5 394 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TCF15Q12870 199 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 STX5Q13190 355 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TUBB3Q13509 450 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CYLC2Q14093 348 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 PDCD4Q53EL6 469 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CCDC157Q569K6 752 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TCTE1Q5JU00 501 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CCNYL2Q5T2Q4 361 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NIPAL1Q6NVV3 410 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NOXRED1Q6NXP6 359 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM71Q6P5X7 295 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 Q6ZSR9 355 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 USP53Q70EK8 1073 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 RNF44Q7L0R7 432 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NAXDQ8IW45 347 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM132CQ8N3T6 1108 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 FITM2Q8N6M3 262 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CSNK1A1LQ8N752 337 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ANKRD53Q8N9V6 530 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SUMF1Q8NBK3 374 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 GAL3ST3Q96A11 431 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 PRR11Q96HE9 360 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TRAPPC9Q96Q05 1148 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC25A23Q9BV35 468 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 EBPLQ9BY08 206 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 MS4A8Q9BY19 250 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 SPNS1Q9H2V7 528 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 LRRN3Q9H3W5 708 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 FAM86C1Q9NVL1 165 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 NDE1Q9NXR1 346 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ASIC5Q9NY37 505 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ZIM2Q9NZV7 527 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 CCDC167Q9P0B6 97 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 TAGLN3Q9UI15 199 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 PLCL2Q9UPR0 1127 aa9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 MN1Q10571 1320 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-202ENST00000474048 ZNF318Q5VUA4 2279 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 HEATR5BQ9P2D3 2071 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 KNL1Q8NG31 2342 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 DYTNA2CJ06 578 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 A8MU76 341 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 TOX3O15405 576 aaPredicted RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 SRPX2O60687 465 aaPredicted RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 UBOX5O94941 541 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 GP1BAP07359 652 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PRR35P0CG20 571 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 GIMD1P0DJR0 217 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PIK3R1P27986 724 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PRDX6P30041 224 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 NBL1P41271 181 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 TSFMP43897 325 aaKnown RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 ARFIP1P53367 373 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PLA2G16P53816 162 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PPP1CAP62136 330 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 KLF10Q13118 480 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 ART3Q13508 389 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 KRT72Q14CN4 511 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 DPY19L1Q2PZI1 675 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 RFTN2Q52LD8 501 aaPredicted RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 MANEAQ5SRI9 462 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PERM1Q5SV97 790 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PHF19Q5T6S3 580 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 DEPDC1Q5TB30 811 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 FCRL6Q6DN72 434 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 COMMD6Q7Z4G1 85 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PRSS42Q7Z5A4 293 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 R3HCC1LQ7Z5L2 792 aaKnown RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 METTL4Q8N3J2 472 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 RNF175Q8N4F7 328 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 CPSF7Q8N684 471 aaKnown RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 PCYOX1LQ8NBM8 494 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 GLB1L3Q8NCI6 653 aaPredicted RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 OR2L5Q8NG80 312 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 OR4D9Q8NGE8 314 aa9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 RP9Q8TA86 221 aaKnown RBP9.81□□□□□ -0.84
PRPF38A-202ENST00000474048 FLVCR1-AS1Q8TAF5 88 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms