RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 SH3BP5O60239 455 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 KLHL41O60662 606 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 THRAP10827 490 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 DDX39BQ13838 428 aaKnown RBP18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 GSTA3Q16772 222 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 AMZ1Q400G9 498 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 AASDHQ4L235 1098 aaPredicted RBP18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 SPIN4Q56A73 249 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 GLRX5Q86SX6 157 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 ASPGQ86U10 573 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 METTL4Q8N3J2 472 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 D2HGDHQ8N465 521 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 ZNF717Q9BY31 904 aaPredicted RBP18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 NMUR2Q9GZQ4 415 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 AICDAQ9GZX7 198 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 AIG1Q9NVV5 245 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 TMEM9Q9P0T7 183 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 SLC12A4Q9UP95 1085 aa18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 MDC1Q14676 2089 aaKnown RBP18.56■□□□□ 0.56
CHMP2B-204ENST00000472024 WDR87Q6ZQQ6 2873 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 FCHO1O14526 889 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 SRPX2O60687 465 aaPredicted RBP18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 PRAMEF10O60809 474 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 PEX11AO75192 247 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 TSFMP43897 325 aaKnown RBP18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 RFTN2Q52LD8 501 aaPredicted RBP18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 CACHD1Q5VU97 1274 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 TMPRSS9Q7Z410 1059 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 MTDHQ86UE4 582 aaKnown RBP18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 SLITRK4Q8IW52 837 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 ARHGEF39Q8N4T4 335 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 CAMKVQ8NCB2 501 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 APIPQ96GX9 242 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 LRRC37BQ96QE4 947 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 PDE7BQ9NP56 450 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 SDR39U1Q9NRG7 319 aaPredicted RBP18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 GIMAP2Q9UG22 337 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 ADAM29Q9UKF5 820 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 PCDHGA1Q9Y5H4 931 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 GPR45Q9Y5Y3 372 aa18.55■□□□□ 0.56
CHMP2B-204ENST00000472024 COL27A1Q8IZC6 1860 aaPredicted RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 D6RAR5 112 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 H0YGG7 62 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 ZSCAN9O15535 394 aaPredicted RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 SCELO95171 688 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 TGFB1P01137 390 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 SMIM10L1P0DMW3 83 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 IDO1P14902 403 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 NELFEP18615 380 aaKnown RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 HNRNPH1P31943 449 aaKnown RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 EMP3P54852 163 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 ARF3P61204 181 aaPredicted RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 HSD11B2P80365 405 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 CYP4F3Q08477 520 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 TRA2AQ13595 282 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 SQLEQ14534 574 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 STPG1Q5TH74 334 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 TMEM198Q66K66 360 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 NXNQ6DKJ4 435 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 FRMPD2BQ6IN97 320 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 USP53Q70EK8 1073 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 CLNKQ7Z7G1 428 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 SLC13A3Q8WWT9 602 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 MS4A6EQ96DS6 147 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 SMIM10Q96HG1 83 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 OR51B5Q9H339 312 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 NOP53Q9NZM5 478 aaKnown RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 PLCL2Q9UPR0 1127 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 RUVBL1Q9Y265 456 aaKnown RBP18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 ZNF292O60281 2723 aa18.54■□□□□ 0.56
CHMP2B-204ENST00000472024 A0A0J9YVX5 310 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 IGHV5-10-1A0A0J9YXX1 117 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 FITM1A5D6W6 292 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 CAPN14A8MX76 684 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 H3BMH7 237 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 TXNDC9O14530 226 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 ANKRD28O15084 1053 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 CASC3O15234 703 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 NDUFS4O43181 175 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 SEC22BO75396 215 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 SLC35G6P0C7Q6 338 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 PRPS2P11908 318 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 MAPK1P28482 360 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 C21orf58P58505 322 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 STXBP1P61764 594 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 RPL38P63173 70 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 RAE1P78406 368 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 ZFP36L1Q07352 338 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 RGS1Q08116 209 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 PRTGQ2VWP7 1150 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 PDCD4Q53EL6 469 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 TRPM8Q7Z2W7 1104 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 UBE3DQ7Z6J8 389 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 MCATQ8IVS2 390 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 FITM2Q8N6M3 262 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 FNDC5Q8NAU1 212 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 SRFBP1Q8NEF9 429 aaKnown RBP18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 OR2L5Q8NG80 312 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 FCRL4Q96PJ5 515 aa18.53■□□□□ 0.56
CHMP2B-204ENST00000472024 CCDC106Q9BWC9 280 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms