RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 IGSF5Q9NSI5 407 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 IRAK4Q9NWZ3 460 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 PLAGL1Q9UM63 463 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 OSGIN2Q9Y236 505 aa8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TDRKHQ9Y2W6 561 aaKnown RBP8.65□□□□□ -1.02
SF3A1-206ENST00000471037 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 A0A1B0GUH1 482 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 FITM1A5D6W6 292 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 ZG16O60844 167 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 ALOX12BO75342 701 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 FKBP9O95302 570 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 PRF1P14222 555 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 CD1DP15813 335 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 RPA3P35244 121 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 GMPRP36959 345 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 DLG1Q12959 904 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 CDC16Q13042 620 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 GRM7Q14831 915 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 TECRLQ5HYJ1 363 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 TCTE1Q5JU00 501 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 FAM180AQ6UWF9 173 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 PIWIL4Q7Z3Z4 852 aaKnown RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 ADAMTSL2Q86TH1 951 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 MCATQ8IVS2 390 aaKnown RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 SLC22A15Q8IZD6 547 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 OR11G2Q8NGC1 345 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 RHEBL1Q8TAI7 183 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 STAG3L4Q8TBR4 150 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 RDH11Q8TC12 318 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 EEF1AKMT1Q8WVE0 214 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 KIAA1191Q96A73 305 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 SLC22A18Q96BI1 424 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 SCYL1Q96KG9 808 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 GPR78Q96P69 363 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 FAM111AQ96PZ2 611 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 MRPL57Q9BQC6 102 aaKnown RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 MRPL46Q9H2W6 279 aaKnown RBP8.64□□□□□ -1.03
SF3A1-206ENST00000471037 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 TMEM216Q9P0N5 145 aa8.64□□□□□ -1.03
SF3A1-206ENST00000471037 CCDC88CQ9P219 2028 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 VSTM2BA6NLU5 285 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SYCE1LA8MT33 242 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SLC16A5O15375 505 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ZBTB14O43829 449 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 PLIN3O60664 434 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 KERAO60938 352 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 PROCP04070 461 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 RPN2P04844 631 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 C8GP07360 202 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 DHRS4L1P0CG22 281 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 TFEBP19484 476 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 POU3F2P20265 443 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ETV4P43268 484 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 TDGF1P3P51864 188 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 Q0VFX4 171 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SP140Q13342 867 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 MFAP5Q13361 173 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 MPP2Q14168 576 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 GRB7Q14451 532 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 RBBP7Q16576 425 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF324BQ6AW86 544 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ISLR2Q6UXK2 745 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 UNC5DQ6UXZ4 953 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 NAPRTQ6XQN6 538 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 CYHR1Q6ZMK1 362 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ISCA2Q86U28 154 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 DCUN1D3Q8IWE4 304 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 FAM20CQ8IXL6 584 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SPATA6LQ8N4H0 392 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 BCORP1Q8N888 145 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ANKRD42Q8N9B4 389 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 CCDC63Q8NA47 563 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 TTC29Q8NA56 475 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 OR2L8Q8NGY9 312 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 RELTQ969Z4 430 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 MOCOSQ96EN8 888 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 THOC3Q96J01 351 aaKnown RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 FOPNLQ96NB1 174 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 LMF1Q96S06 567 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ALG9Q9H6U8 611 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 OLAHQ9NV23 265 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 INTS7Q9NVH2 962 aaKnown RBP8.63□□□□□ -1.03
SF3A1-206ENST00000471037 ZNF358Q9NW07 568 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SLC17A7Q9P2U7 560 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 XPR1Q9UBH6 696 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 CTSFQ9UBX1 484 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 EMCNQ9ULC0 261 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 TMCO1Q9UM00 188 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 KLHL20Q9Y2M5 609 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 KLK4Q9Y5K2 254 aa8.63□□□□□ -1.03
SF3A1-206ENST00000471037 SNRNP200O75643 2136 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 A0A1W2PQ72 361 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ARHGAP10A1A4S6 786 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms