RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 RAPH1Q70E73 1250 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 SPATA21Q7Z572 469 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 HOOK3Q86VS8 718 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 RCOR2Q8IZ40 523 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 SYCP3Q8IZU3 236 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 OCC1Q8TAD7 63 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 SNX21Q969T3 373 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 C2orf48Q96LS8 159 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-202ENST00000470094 AGAP4Q96P64 663 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 KLHL5Q96PQ7 755 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 INPP5KQ9BT40 448 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 KATNB1Q9BVA0 655 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 GTPBP2Q9BX10 602 aaKnown RBP3.29□□□□□ -1.88
BRCA2-202ENST00000470094 MMADHCQ9H3L0 296 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-202ENST00000470094 MTHFD2LQ9H903 347 aaPredicted RBP3.29□□□□□ -1.88
BRCA2-202ENST00000470094 RNF121Q9H920 327 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 PANK3Q9H999 370 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 ABCB8Q9NUT2 735 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 POLLQ9UGP5 575 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 KLK13Q9UKR3 277 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 WIPI2Q9Y4P8 454 aa3.29□□□□□ -1.88
BRCA2-202ENST00000470094 ARID2Q68CP9 1835 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 IL16Q14005 1332 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 IGHV3OR16-10A0A075B7F0 116 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SLC30A4O14863 429 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 IFIT3O14879 490 aaKnown RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 LUC7L3O95232 432 aaKnown RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SERPING1P05155 500 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 EEF2P13639 858 aaKnown RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 GATA1P15976 413 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 ACADSP16219 412 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 AADACP22760 399 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 ACAT1P24752 427 aaKnown RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 PSMA3P25788 255 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SHC1P29353 583 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 RBMS1P29558 406 aaKnown RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SFTPDP35247 375 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 DSCR10P59022 87 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 CACNG1Q06432 222 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 RBBP7Q16576 425 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 FGD3Q5JSP0 725 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 GLRA4Q5JXX5 417 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 P2RY8Q86VZ1 359 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 ZSCAN30Q86W11 494 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 GPC2Q8N158 579 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 METTL4Q8N3J2 472 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 C10orf53Q8N6V4 93 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 LRTM2Q8N967 370 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SEPT1Q8WYJ6 367 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 PYCR2Q96C36 320 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SPATA33Q96N06 139 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 DCTN5Q9BTE1 182 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SNX25Q9H3E2 840 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 EGLN3Q9H6Z9 239 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 CWC25Q9NXE8 425 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 PKD2L2Q9NZM6 624 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 ARMCX3Q9UH62 379 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 LNPEPQ9UIQ6 1025 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 LEF1Q9UJU2 399 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-202ENST00000470094 SNX7Q9UNH6 387 aa3.28□□□□□ -1.88
BRCA2-202ENST00000470094 OOEPA6NGQ2 149 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 C5orf52A6NGY3 159 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 ASB14A6NK59 587 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 SLC1A7O00341 560 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TFECO14948 347 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 VIMP08670 466 aaKnown RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 STAG3L1P0CL83 205 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 EPORP19235 508 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 PDHA2P29803 388 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TIA1P31483 386 aaKnown RBP eCLIP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 MTCP1P56278 107 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 C17orf67Q0P5P2 114 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 AP1B1Q10567 949 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 SRSF9Q13242 221 aaKnown RBP eCLIP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 LY6DQ14210 128 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 UGCGQ16739 394 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 C2orf76Q3KRA6 126 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 CYB5D1Q6P9G0 228 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 GBP6Q6ZN66 633 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 GPRIN3Q6ZVF9 776 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 AMIGO1Q86WK6 493 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 CREBRFQ8IUR6 639 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 CCDC60Q8IWA6 550 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TUSC5Q8IXB3 177 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 KLHL7Q8IXQ5 586 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 GBP7Q8N8V2 638 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 CCDC63Q8NA47 563 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 NHLRC2Q8NBF2 726 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 OR4D10Q8NGI6 311 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 OR4C15Q8NGM1 316 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 MIPOL1Q8TD10 442 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 ATP8B4Q8TF62 1192 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 DNASE1L2Q92874 299 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 ST6GALNAC6Q969X2 333 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms