RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-209	ENST00000470083	RBCK1	Q9BYM8	510 aa		11.18	□□□□□ -0.62
LSM2-209	ENST00000470083	MTRF1L	Q9UGC7	380 aa	Known RBP	11.18	□□□□□ -0.62
LSM2-209	ENST00000470083	TAC3	Q9UHF0	121 aa		11.18	□□□□□ -0.62
LSM2-209	ENST00000470083	LIPG	Q9Y5X9	500 aa		11.18	□□□□□ -0.62
LSM2-209	ENST00000470083	CUBN	O60494	3623 aa		11.18	□□□□□ -0.62
LSM2-209	ENST00000470083	PINLYP	A6NC86	204 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	TRIM64	A6NGJ6	449 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	TRIM64B	A6NI03	449 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	SAGE2P	A6NJ88	616 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	HSPB2	A8KAH6	182 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	APOC4-APOC2	K7ER74	178 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	DVL2	O14641	736 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	SMPD2	O60906	423 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	RDH16	O75452	317 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	STK10	O94804	968 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	GLS	O94925	669 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	F12	P00748	615 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	APOC2	P02655	101 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	STATH	P02808	62 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	HRG	P04196	525 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	GABRA1	P14867	456 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	BMP7	P18075	431 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	BMP5	P22003	454 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	ZBED6	P86452	979 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	CBLB	Q13191	982 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	ARHGAP19	Q14CB8	494 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	HSPB2	Q16082	182 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	KCTD11	Q693B1	232 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	TMEM214	Q6NUQ4	689 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	KIAA0408	Q6ZU52	694 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	VN1R4	Q7Z5H5	301 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	ADCK2	Q7Z695	626 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	KIF18B	Q86Y91	864 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	PLD3	Q8IV08	490 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	CCDC50	Q8IVM0	306 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	PSD4	Q8NDX1	1056 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	OR13J1	Q8NGT2	312 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	OR9A1P	Q8NGU1	263 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	MRFAP1L1	Q96HT8	127 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	SECISBP2	Q96T21	854 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	YIPF4	Q9BSR8	244 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	DEFB126	Q9BYW3	111 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	TTTY12	Q9BZ98	90 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	ANKH	Q9HCJ1	492 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083	ACAD8	Q9UKU7	415 aa		11.17	□□□□□ -0.62
LSM2-209	ENST00000470083		A0A1W2PPR1	153 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PRMT5	O14744	637 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	KPNA5	O15131	536 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PSTPIP1	O43586	416 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	SUSD5	O60279	629 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	KIF5C	O60282	957 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	ITGA10	O75578	1167 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	GOT2	P00505	430 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PPARG	P37231	505 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	ABAT	P80404	500 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	TSTA3	Q13630	321 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	SLC18A3	Q16572	532 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	TYSND1	Q2T9J0	566 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	WLS	Q5T9L3	541 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	NDUFAF5	Q5TEU4	345 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	SASS6	Q6UVJ0	657 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	BBS12	Q6ZW61	710 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	YTHDF3	Q7Z739	585 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PDSS2	Q86YH6	399 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	FAM109A	Q8N4B1	249 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	OR2M7	Q8NG81	312 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	SARAF	Q96BY9	339 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PEX11G	Q96HA9	241 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PANX3	Q96QZ0	392 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	EBNA1BP2	Q99848	306 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	PIH1D1	Q9NWS0	290 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	HYOU1	Q9Y4L1	999 aa		11.16	□□□□□ -0.62
LSM2-209	ENST00000470083	KCNE1B	A0A087WTH5	132 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083		A0A0G2JMM0	328 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083		A0A1W2PPB8	328 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083		A0A1W2PRS3	328 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	KIR3DP1	A8MWS1	328 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	MYO1C	O00159	1063 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	SLC16A5	O15375	505 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	SPOP	O43791	374 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	MATN4	O95460	622 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	FH	P07954	510 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	COMT	P21964	271 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	HSD17B2	P37059	387 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	SORD	Q00796	357 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	MEF2A	Q02078	507 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	SEMA3A	Q14563	771 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	ANKRD20A4	Q4UJ75	823 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	CCDC38	Q502W7	563 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	PTRHD1	Q6GMV3	140 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	HMBOX1	Q6NT76	420 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	PODNL1	Q6PEZ8	512 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	GK5	Q6ZS86	529 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	SEM1	Q6ZVN7	128 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	ZNF534	Q76KX8	674 aa		11.15	□□□□□ -0.62
LSM2-209	ENST00000470083	OTOA	Q7RTW8	1153 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms