RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 SLC38A4Q969I6 547 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 COPS4Q9BT78 406 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 ITPAQ9BY32 194 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 DSN1Q9H410 356 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 SPATA6Q9NWH7 488 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 OSGIN1Q9UJX0 560 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 ZNF451Q9Y4E5 1061 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 PCDHGB3Q9Y5G1 929 aa15.22■□□□□ 0.03
TSPAN4-211ENST00000468468 SCAMP2O15127 329 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 LRG1P02750 347 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 PABPC1P11940 636 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 TCEA1P23193 301 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 CSNK2BP67870 215 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 INAVAQ3KP66 663 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 PLEKHG7Q6ZR37 379 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 MCFD2Q8NI22 146 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 DACH2Q96NX9 599 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 PSD2Q9BQI7 771 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 C11orf49Q9H6J7 331 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 POLE4Q9NR33 117 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 OBSL1O75147 1896 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 A6NL46 340 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 KPNA5O15131 536 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 UGDHO60701 494 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 CNOT3O75175 753 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 C8AP07357 584 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 CTSAP10619 480 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 PPM1AP35813 382 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 LIPAP38571 399 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 ZNF33BQ06732 778 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 RGNQ15493 299 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 HKDC1Q2TB90 917 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 MPP7Q5T2T1 576 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 ZDHHC20Q5W0Z9 365 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 DPY19L3Q6ZPD9 716 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 HTR3DQ70Z44 454 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 C1orf52Q8N6N3 182 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 RHOXF1Q8NHV9 184 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 SPPL2AQ8TCT8 520 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 MED8Q96G25 268 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 GABARAPL3Q9BY60 117 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 DCSTAMPQ9H295 470 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 CHST8Q9H2A9 424 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 TESMINQ9Y4I5 508 aa15.21■□□□□ 0.03
TSPAN4-211ENST00000468468 E9PQ18 207 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 DPM1O60762 260 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 CXCL14O95715 111 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 ANXA4P09525 319 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 C21orf33P30042 268 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 NAE1Q13564 534 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 ADNP2Q6IQ32 1131 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 FAM124AQ86V42 546 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 SLC22A16Q86VW1 577 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 NAGSQ8N159 534 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 CPXM2Q8N436 756 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 VPS37AQ8NEZ2 397 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 PSMA8Q8TAA3 256 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 PROX1Q92786 737 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 DOHHQ9BU89 302 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 SPATA9Q9BWV2 254 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 SGK2Q9HBY8 427 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 ZBTB20Q9HC78 741 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 AMBNQ9NP70 447 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 C1orf226A1L170 272 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 AQP9O43315 295 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 ETHE1O95571 254 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 C21orf58P58505 322 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 RAE1P78406 368 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 PRSS36Q5K4E3 855 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 NEK10Q6ZWH5 1172 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 VASH1Q7L8A9 365 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 DSG4Q86SJ6 1040 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 ASZ1Q8WWH4 475 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 FEVQ99581 238 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 TMEM184CQ9NVA4 438 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 BTNL2Q9UIR0 455 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 KIAA1671Q9BY89 1806 aa15.2■□□□□ 0.02
TSPAN4-211ENST00000468468 OR2AG2A6NM03 316 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 ARHGEF33A8MVX0 844 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 TNFRSF11BO00300 401 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 CCL16O15467 120 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 AIREO43918 545 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 KDM1AO60341 852 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 POP4O95707 220 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 ABCB1P08183 1280 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 PPP5CP53041 499 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 ELP6Q0PNE2 266 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 GAB1Q13480 694 aa15.19■□□□□ 0.02
TSPAN4-211ENST00000468468 KCNC3Q14003 757 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms