RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZFP69BQ9UJL9 534 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 NAALAD2Q9Y3Q0 740 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 CSAG2Q9Y5P2 127 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 KCNE2Q9Y6J6 123 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 DOPEY1Q5JWR5 2465 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 HIVEP3Q5T1R4 2406 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 DYTNA2CJ06 578 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 NPEPPSL1A6NEC2 478 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 CDC7O00311 574 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 KLHL18O94889 574 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 GP1BBP13224 206 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 AGTR2P50052 363 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 SNRPNP63162 240 aaKnown RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 ARG2P78540 354 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 MRPS25P82663 173 aaKnown RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 MEF2AQ02078 507 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 RGS1Q08116 209 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 CDC16Q13042 620 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 MRPL49Q13405 166 aaKnown RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 ELOAQ14241 798 aaKnown RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 NR6A1Q15406 480 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 CAPN12Q6ZSI9 719 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 ABHD13Q7L211 337 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
COL7A1-207ENST00000467985 PDSS2Q86YH6 399 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 AFAP1L2Q8N4X5 818 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 TRPV3Q8NET8 790 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 PSMF1Q92530 271 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 IMMP1LQ96LU5 166 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 TSNARE1Q96NA8 513 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 PSMG3-AS1Q96PY0 264 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 OR1F2PQ96R84 312 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 EGFL8Q99944 293 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 AIF1LQ9BQI0 150 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 RAB17Q9H0T7 212 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 LRRC4CQ9HCJ2 640 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 PTGFRNQ9P2B2 879 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 IKZF3Q9UKT9 509 aa18.03■□□□□ 0.48
COL7A1-207ENST00000467985 URADA6NGE7 173 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 RDH16O75452 317 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 JRKO75564 520 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 CBX6O95503 412 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 SSTR1P30872 391 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 SCTRP47872 440 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 ZNF460Q14592 562 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 CATSPEREQ5SY80 951 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 RPUSD3Q6P087 351 aaKnown RBP18.02■□□□□ 0.48
COL7A1-207ENST00000467985 NXPE4Q6UWF7 544 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 CEP97Q8IW35 865 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 ZNF740Q8NDX6 193 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 NT5CQ8TCD5 201 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 CPNE1Q99829 537 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 DERL2Q9GZP9 239 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 CLK4Q9HAZ1 481 aaKnown RBP18.02■□□□□ 0.48
COL7A1-207ENST00000467985 GRHL1Q9NZI5 618 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 TEKT2Q9UIF3 430 aa18.02■□□□□ 0.48
COL7A1-207ENST00000467985 UNC79Q9P2D8 2635 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 ANKUB1A6NFN9 424 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 GALR3O60755 368 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SERPIND1P05546 499 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 ALOX12P18054 663 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 GNAZP19086 355 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 REEP5Q00765 189 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 TSNQ15631 228 aaKnown RBP18.01■□□□□ 0.47
COL7A1-207ENST00000467985 EIF2S3LQ2VIR3 472 aaKnown RBP18.01■□□□□ 0.47
COL7A1-207ENST00000467985 PLAG1Q6DJT9 500 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 C3orf62Q6ZUJ4 267 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 MMGT1Q8N4V1 131 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SIRT6Q8N6T7 355 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 PRR7Q8TB68 274 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SSC4DQ8WTU2 575 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 ANKRD49Q8WVL7 239 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 HAS2Q92819 552 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 RNF32Q9H0A6 362 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SMYD2Q9NRG4 433 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SLC22A14Q9Y267 594 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 SCN3AQ9NY46 2000 aa18.01■□□□□ 0.47
COL7A1-207ENST00000467985 TRAV17A0A0B4J275 112 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 TCRBV9S1A1TA0A576 114 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 BLACEA4D250 179 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 FAM159BA6NKW6 160 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 DDAH2O95865 285 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 MYBL2P10244 700 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 JAK1P23458 1154 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 GP5P40197 560 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 TNFSF10P50591 281 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 EFNA3P52797 238 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 PLTPP55058 493 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 USP10Q14694 798 aaKnown RBP18■□□□□ 0.47
COL7A1-207ENST00000467985 EXT1Q16394 746 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 DEFB134Q4QY38 66 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 CDKL4Q5MAI5 379 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 ANKRD37Q7Z713 158 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 TMPRSS11BQ86T26 416 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 KLHDC8AQ8IYD2 350 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 TCAIMQ8N3R3 496 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 MOCOSQ96EN8 888 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 GPR22Q99680 433 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 RBBP8Q99708 897 aa18■□□□□ 0.47
COL7A1-207ENST00000467985 CAPS2Q9BXY5 557 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms