RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 VN1R4Q7Z5H5 301 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 CISD2Q8N5K1 135 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 TBC1D19Q8N5T2 526 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 MFSD9Q8NBP5 474 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 ZNF740Q8NDX6 193 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 ABHD11Q8NFV4 315 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 OR4K1Q8NGD4 311 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 PRR7Q8TB68 274 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC13A3Q8WWT9 602 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 EXT2Q93063 718 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 NXNL1Q96CM4 212 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 MVB12AQ96EY5 273 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 LMF1Q96S06 567 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 LHPPQ9H008 270 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 ALG9Q9H6U8 611 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 ASF1BQ9NVP2 202 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 CTSFQ9UBX1 484 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 FBXL4Q9UKA2 621 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC5A6Q9Y289 635 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 MRPS2Q9Y399 296 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 KCNE2Q9Y6J6 123 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 IKBKGQ9Y6K9 419 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 A0A087WUV0 522 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TRBC2A0A5B9 178 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 HMX2A2RU54 273 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ANKUB1A6NFN9 424 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TAPBPO15533 448 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 FOXS1O43638 330 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 C2P06681 752 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 LTA4HP09960 611 aaKnown RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TFEBP19484 476 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TYK2P29597 1187 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 MSH2P43246 934 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TSFMP43897 325 aaKnown RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 AVPR1BP47901 424 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 GLRBP48167 497 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 MRPL49Q13405 166 aaKnown RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 RBBP5Q15291 538 aaKnown RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 NR6A1Q15406 480 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 PRR30Q53SZ7 412 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 VWA2Q5GFL6 755 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 SULT1C3Q6IMI6 304 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 KIRREL2Q6UWL6 708 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TMPRSS11BQ86T26 416 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ASPGQ86U10 573 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ISCA2Q86U28 154 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 KCT2Q8NC54 265 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 STAG3L4Q8TBR4 150 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 STT3BQ8TCJ2 826 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 KCTD4Q8WVF5 259 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 SLC44A1Q8WWI5 657 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 MIEF2Q96C03 454 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 FUT8Q9BYC5 575 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 DRC3Q9H069 523 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 SNX15Q9NRS6 342 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 LUZP4Q9P127 313 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 TRPC4Q9UBN4 977 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 ZNF282Q9UDV7 671 aaPredicted RBP13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 HS3ST3B1Q9Y662 390 aa13.33□□□□□ -0.28
CCHCR1-211ENST00000467553 NOTCH2Q04721 2471 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 POLEQ07864 2286 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 CENPEQ02224 2701 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 CNTRLQ7Z7A1 2325 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 IGLV3-12A0A075B6K2 115 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 A0A087X1B8 175 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 SUPT3HB4E1H0 165 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 SUPT3HO75486 399 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 HPP00738 406 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 ZGLP1P0C6A0 271 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 FAM153BP0C7A2 387 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 HSPA7P48741 367 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 AP2B1P63010 937 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 SNRPNP63162 240 aaKnown RBP13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 IRF9Q00978 393 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 FAM53BQ14153 422 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 RBBP7Q16576 425 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 SYT16Q17RD7 645 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 FAM83EQ2M2I3 478 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 FAM153CQ494X1 144 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 TEX35Q5T0J7 233 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 RPUSD3Q6P087 351 aaKnown RBP13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 MAMDC2Q7Z304 686 aaPredicted RBP13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 CUZD1Q86UP6 607 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 ARHGEF39Q8N4T4 335 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 OR9A4Q8NGU2 314 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 C5orf34Q96MH7 638 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms