RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FAM214AQ32MH5 1076 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 TTC19Q6DKK2 380 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 TMEM214Q6NUQ4 689 aaKnown RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 CLYBLQ8N0X4 340 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 TTC29Q8NA56 475 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 MVB12AQ96EY5 273 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 CMTM7Q96FZ5 175 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 C7orf26Q96N11 449 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 LRFN5Q96NI6 719 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 SLC46A1Q96NT5 459 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 CCT7Q99832 543 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 MS4A8Q9BY19 250 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 APMAPQ9HDC9 416 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 TNFRSF12AQ9NP84 129 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 DMRT3Q9NQL9 472 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 RUVBL1Q9Y265 456 aaKnown RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 TRAF6Q9Y4K3 522 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 SLC22A7Q9Y694 548 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 SDK2Q58EX2 2172 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 MED19A0JLT2 244 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 LRIT2A6NDA9 550 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 CDRT15L2A8MXV6 281 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 C9orf172C9J069 976 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 MANBAO00462 879 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 CRCPO75575 148 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 LYPLA1O75608 230 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 TBX6O95947 436 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 CHEK2O96017 543 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 PCNAP12004 261 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 CD82P27701 267 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 FOXA1P55317 472 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SHC2P98077 582 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 CUL3Q13618 768 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 NDUFA9Q16795 377 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 UGT3A2Q3SY77 523 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 TMEM35AQ53FP2 167 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SH2D4BQ5SQS7 431 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 ADNP2Q6IQ32 1131 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 RHBDD2Q6NTF9 364 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 PWWP2BQ6NUJ5 590 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 NIPAL1Q6NVV3 410 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 TRIM46Q7Z4K8 759 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 GBP7Q8N8V2 638 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SRFBP1Q8NEF9 429 aaKnown RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 PROKR1Q8TCW9 393 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SELENOMQ8WWX9 145 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 NXPE2Q96DL1 559 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 FAR2Q96K12 515 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 KCNA7Q96RP8 456 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 SPRTNQ9H040 489 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-205ENST00000466897 ZDHHC2Q9UIJ5 367 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 KLK13Q9UKR3 277 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 ACSL6Q9UKU0 697 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 MSRB2Q9Y3D2 182 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 B3GALT1Q9Y5Z6 326 aa14.47□□□□□ -0.09
NPHP4-205ENST00000466897 HYKKA2RU49 373 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 PMS2P1A4D2B8 440 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 NPIPB8E9PQR5 432 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 FFAR3O14843 346 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 GPR42O15529 346 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF749O43361 778 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 CPNE3O75131 537 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SCRG1O75711 98 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SEMA3DO95025 777 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 TNFSF15O95150 251 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 PDYNP01213 254 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 EIF2S1P05198 315 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 CTSBP07858 339 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SMIM10L1P0DMW3 83 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 PTX3P26022 381 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MDH1P40925 334 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 TSFMP43897 325 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 RPL14P50914 215 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MAPK10P53779 464 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 CYP4F2P78329 520 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MAP7Q14244 749 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 HKDC1Q2TB90 917 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 CHSY3Q70JA7 882 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 ABHD13Q7L211 337 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MARCH9Q86YJ5 346 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 TMEM126BQ8IUX1 230 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 AFAP1L2Q8N4X5 818 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF781Q8N8C0 355 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 GAL3ST3Q96A11 431 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MS4A6EQ96DS6 147 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SMIM10Q96HG1 83 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 C10orf90Q96M02 699 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 MTERF1Q99551 399 aaKnown RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SERPINI1Q99574 410 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 CENPKQ9BS16 269 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 NDC1Q9BTX1 674 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SHCBP1LQ9BZQ2 653 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 SPRY4Q9C004 299 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF395Q9H8N7 513 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-205ENST00000466897 ASCL3Q9NQ33 180 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 PFDN4Q9NQP4 134 aa14.46□□□□□ -0.09
NPHP4-205ENST00000466897 IRAK4Q9NWZ3 460 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms