RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 L3MBTL4Q8NA19 623 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 ZFP28Q8NHY6 868 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SLC29A1Q99808 456 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 CIB1Q99828 191 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 BRINP2Q9C0B6 783 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SMOC1Q9H4F8 434 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 IL21RQ9HBE5 538 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SLC52A3Q9NQ40 469 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 AGPAT4Q9NRZ5 378 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 RIC8BQ9NVN3 520 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 SPASTQ9UBP0 616 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 DOLKQ9UPQ8 538 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 PCDHA9Q9Y5H5 950 aa17.87■□□□□ 0.45
CAPN3-209ENST00000466222 CCDC160A6NGH7 325 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 BTN3A3O00478 584 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 EEDO75530 441 aaKnown RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 CFIP05156 583 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ALDH3B2P48448 385 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 EEFSECP57772 596 aaKnown RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 RCAN2Q14206 197 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TEAD4Q15561 434 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 KCTD21Q4G0X4 260 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 AASDHQ4L235 1098 aaPredicted RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 NHSL2Q5HYW2 709 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 Q6ZSR9 355 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 C11orf74Q86VG3 221 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 SYT12Q8IV01 421 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 CHCHD4Q8N4Q1 142 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TRIML2Q8N7C3 387 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TNIP2Q8NFZ5 429 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 OR2A1Q8NGT9 310 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 OR2I1PQ8NGU4 316 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 OR2L8Q8NGY9 312 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TFAP2CQ92754 450 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 SLC39A3Q9BRY0 314 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 CMTM6Q9NX76 183 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ETAA1Q9NY74 926 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ZIM2Q9NZV7 527 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 SPATA7Q9P0W8 599 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TRPS1Q9UHF7 1281 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 LEF1Q9UJU2 399 aaPredicted RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 KLHL20Q9Y2M5 609 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ANKRD12Q6UB98 2062 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 MYF5P13349 255 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 NME5P56597 212 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 HMGCS1Q01581 520 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 PLCL1Q15111 1095 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 SLC5A11Q8WWX8 675 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ELF4Q99607 663 aaPredicted RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 CLK4Q9HAZ1 481 aaKnown RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 TIMMDC1Q9NPL8 285 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 ZNF490Q9ULM2 529 aaPredicted RBP17.86■□□□□ 0.45
CAPN3-209ENST00000466222 DYRK1BQ9Y463 629 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 R4GN57 208 aa17.86■□□□□ 0.45
CAPN3-209ENST00000466222 IGKV1-8A0A0C4DH67 115 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 LMO7DNF2Z398 122 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 MANBAO00462 879 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 PPM1DO15297 605 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 BMP10O95393 424 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 PDYNP01213 254 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 HSD17B2P37059 387 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 HHEXQ03014 270 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 ZNF528Q3MIS6 628 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 GKN2Q86XP6 184 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 GATAD2AQ86YP4 633 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 ADGRF3Q8IZF5 1079 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 TMEM125Q96AQ2 219 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 CENPNQ96H22 339 aaPredicted RBP17.85■□□□□ 0.45
CAPN3-209ENST00000466222 SRMSQ9H3Y6 488 aa17.85■□□□□ 0.45
CAPN3-209ENST00000466222 KIR2DS5A0A0G2JLQ3 304 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 A0A0G2JNG1 304 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 H7BY64 318 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 KIR2DS3K7RE56 304 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ARPC2O15144 300 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 PRICKLE3O43900 615 aaPredicted RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 NOBOXO60393 691 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 SH3BGRLO75368 114 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ULK1O75385 1050 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 JUPP14923 745 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 NDUFS1P28331 727 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ERVK-8P63133 956 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 NFYCQ13952 458 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 SLBPQ14493 270 aaKnown RBP eCLIP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 KIR2DS5Q14953 304 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ATP6AP1Q15904 470 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 TMTC4Q5T4D3 741 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 NXPE4Q6UWF7 544 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 LCTLQ6UWM7 567 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ZNF438Q7Z4V0 828 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ADGRG5Q8IZF4 528 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 ARL14Q8N4G2 192 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 PAPD5Q8NDF8 572 aaKnown RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 TRPV3Q8NET8 790 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 OR10G6Q8NH81 332 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 PRAP1Q96NZ9 151 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 MTERF1Q99551 399 aaKnown RBP17.84■□□□□ 0.45
CAPN3-209ENST00000466222 OLAHQ9NV23 265 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 CEPT1Q9Y6K0 416 aa17.84■□□□□ 0.45
CAPN3-209ENST00000466222 AK5Q9Y6K8 562 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms