RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 PIK3CGP48736 1102 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 ARG2P78540 354 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 REEP5Q00765 189 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 CDC16Q13042 620 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RBBP5Q15291 538 aaKnown RBP12.72□□□□□ -0.37
COMMD3-205ENST00000463688 NADK2Q4G0N4 442 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 ABHD17BQ5VST6 288 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 FAM69BQ5VUD6 431 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RPUSD3Q6P087 351 aaKnown RBP12.72□□□□□ -0.37
COMMD3-205ENST00000463688 TMIGD1Q6UXZ0 262 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 SHISA6Q6ZSJ9 500 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 VN1R4Q7Z5H5 301 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 TMPRSS11BQ86T26 416 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RELL1Q8IUW5 271 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PRSS58Q8IYP2 241 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 AFAP1L2Q8N4X5 818 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PLPP5Q8NEB5 264 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 OR9A4Q8NGU2 314 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 NEIL2Q969S2 332 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PYCR2Q96C36 320 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RHBDF1Q96CC6 855 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 LPAR4Q99677 370 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 WDR83Q9BRX9 315 aaKnown RBP12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 ZNF160Q9HCG1 818 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
COMMD3-205ENST00000463688 DNAJC11Q9NVH1 559 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 TMCO1Q9UM00 188 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 ACOT9Q9Y305 439 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 PSAT1Q9Y617 370 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 SPACA6W5XKT8 324 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
COMMD3-205ENST00000463688 BLACEA4D250 179 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 NPEPPSL1A6NEC2 478 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MAGEB17A8MXT2 336 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 CDC7O00311 574 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 PDGFAP04085 211 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 PRR35P0CG20 571 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 RNH1P13489 461 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 CNTFP26441 200 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 TSFMP43897 325 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MLLT10P55197 1068 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 YBX1P67809 324 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 ZNF169Q14929 603 aaPredicted RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 TSNQ15631 228 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 NSDHLQ15738 373 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 PLAG1Q6DJT9 500 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MBOAT1Q6ZNC8 495 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 CAPN12Q6ZSI9 719 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 LRRC70Q7Z2Q7 622 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 CPEB2Q7Z5Q1 589 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 PLD3Q8IV08 490 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 ZC3H7AQ8IWR0 971 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 M1APQ8TC57 530 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 HAS2Q92819 552 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 ZNF354BQ96LW1 612 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MCMBPQ9BTE3 642 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 LRRC4CQ9HCJ2 640 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 NUDT4Q9NZJ9 180 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 CD274Q9NZQ7 290 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 NAALAD2Q9Y3Q0 740 aa12.71□□□□□ -0.37
COMMD3-205ENST00000463688 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
COMMD3-205ENST00000463688 FEZF1A0PJY2 475 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 K7EM74 188 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.38
COMMD3-205ENST00000463688 CLEC3AO75596 197 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 DDAH2O95865 285 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 FHP07954 510 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 LTA4HP09960 611 aaKnown RBP12.71□□□□□ -0.38
COMMD3-205ENST00000463688 COX6A1P12074 109 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 GLRBP48167 497 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 SERPINB9P50453 376 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 PHEXP78562 749 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 GUCY2DQ02846 1103 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 RAPSNQ13702 412 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 SLMAPQ14BN4 828 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 TBCCQ15814 346 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 PDK4Q16654 411 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 KBTBD12Q3ZCT8 623 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 LGI4Q8N135 537 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 SLC5A8Q8N695 610 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 PDPRQ8NCN5 879 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 RHEBL1Q8TAI7 183 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 FBF1Q8TES7 1133 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 ZNF592Q92610 1267 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 REPS1Q96D71 796 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.38
COMMD3-205ENST00000463688 UBXN10Q96LJ8 280 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 MFRPQ9BY79 579 aa12.71□□□□□ -0.38
COMMD3-205ENST00000463688 VN1R1Q9GZP7 353 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms