RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM149AA5PLN7 773 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PABPN1LA6NDY0 278 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ZNF701M0R085 212 aaPredicted RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PLOD2O00469 737 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FFAR3O14843 346 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 GPR42O15529 346 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SH3BP5O60239 455 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SLCO2B1O94956 709 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FTH1P02794 183 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 C6P13671 934 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ATP6V1B1P15313 513 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 RABIFP47224 123 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ARRB1P49407 418 aaPredicted RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PFN3P60673 137 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 YPEL5P62699 121 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ADARB1P78563 741 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FOXK2Q01167 660 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CHRNB3Q05901 458 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SHBQ15464 509 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 WSCD2Q2TBF2 565 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CYBRD1Q53TN4 286 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SPANXN4Q5MJ08 99 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PRAMEF14Q5SWL7 426 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 LIPJQ5W064 366 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SUSD1Q6UWL2 747 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PATL1Q86TB9 770 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CALHM3Q86XJ0 350 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 MSRB3Q8IXL7 192 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 TRIML2Q8N7C3 387 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 TP53I13Q8NBR0 393 aaPredicted RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PNPT1Q8TCS8 783 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 MCOLN3Q8TDD5 553 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 VPS35Q96QK1 796 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 HBEGFQ99075 208 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 MYOCQ99972 504 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ZSCAN5AQ9BUG6 496 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 TRIM8Q9BZR9 551 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PAIP1Q9H074 479 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM83DQ9H4H8 585 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 RMND5AQ9H871 391 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FARSBQ9NSD9 589 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DNAJC11Q9NVH1 559 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 TSR3Q9UJK0 312 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CEPT1Q9Y6K0 416 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PCM1Q15154 2024 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SPTY2D1-AS1A0A0U1RR47 76 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ELOVL7A1L3X0 281 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 PDLIM1O00151 329 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 PSMD11O00231 422 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 UPK1AO00322 258 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 EI24O14681 340 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 FLRT2O43155 660 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SGTAO43765 313 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 LZTS3O60299 673 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 TPST1O60507 370 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 CBFA2T3O75081 653 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 PDYNP01213 254 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 GSTM1P09488 218 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ELFN1P0C7U0 828 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 HSD3B1P14060 373 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 CDH2P19022 906 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 HSD3B2P26439 372 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 TTKP33981 857 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ALDH3A2P51648 485 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MTPNP58546 118 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 HMGCS1Q01581 520 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 GSTM4Q03013 218 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 EPS8Q12929 822 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ABRQ12979 859 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MYBPC3Q14896 1274 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ZXDCQ2QGD7 858 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ABRAXAS1Q6UWZ7 409 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MBOAT1Q6ZNC8 495 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SLC22A18ASQ8N1D0 253 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SVOPLQ8N434 492 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 BEND7Q8N7W2 519 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SAP25Q8TEE9 199 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ASZ1Q8WWH4 475 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SELENOMQ8WWX9 145 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ATL1Q8WXF7 558 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 GLMNQ92990 594 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ITCHQ96J02 903 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 RNF145Q96MT1 663 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 OR52E6Q96RD3 313 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 ELOVL6Q9H5J4 265 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 CAAP1Q9H8G2 361 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 NTN4Q9HB63 628 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SERHLQ9NQF3 203 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
PTPRD-207ENST00000463477 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 DNAJB9Q9UBS3 223 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 USP22Q9UPT9 525 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 MAPRE3Q9UPY8 281 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 NCOR2Q9Y618 2525 aa9.54□□□□□ -0.88
PTPRD-207ENST00000463477 A8MX80 341 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms