RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SNRPNP63162 240 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SRSF11Q05519 484 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ART3Q13508 389 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SF1Q15637 639 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZKSCAN8Q15776 578 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 INAQ16352 499 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRTGQ2VWP7 1150 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 KBTBD12Q3ZCT8 623 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 VWA2Q5GFL6 755 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 WASHC2DQ5SRD0 308 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 IRAK1BP1Q5VVH5 260 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ICE2Q659A1 982 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 C3orf62Q6ZUJ4 267 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 RELL1Q8IUW5 271 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PALM2Q8IXS6 379 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRSS58Q8IYP2 241 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ARHGEF39Q8N4T4 335 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 RAB42Q8N4Z0 105 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SIRT6Q8N6T7 355 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 MNS1Q8NEH6 495 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR1N1Q8NGS0 311 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 BRIX1Q8TDN6 353 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 FBF1Q8TES7 1133 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZUFSPQ96AP4 578 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 TRIM44Q96DX7 344 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 CCDC120Q96HB5 630 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 CPNE1Q99829 537 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PLCD4Q9BRC7 762 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 DPH7Q9BTV6 452 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 SGPP1Q9BX95 441 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 CDC42EP4Q9H3Q1 356 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 CAB39LQ9H9S4 337 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PARVBQ9HBI1 364 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 POPDC3Q9HBV1 291 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF304Q9HCX3 659 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 INTS7Q9NVH2 962 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 PLA2G3Q9NZ20 509 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 NINJ2Q9NZG7 142 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 COPG2Q9UBF2 871 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 TAC3Q9UHF0 121 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 C3orf18Q9UK00 162 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 KLF2Q9Y5W3 355 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 DNHD1Q96M86 4753 aa7.51□□□□□ -1.21
CDC42BPA-210ENST00000462553 LOC102723996A0A087X1L8 192 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 IGHV1-45A0A0A0MS14 117 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 A0A0J9YVX5 310 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 HMX2A2RU54 273 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 NPEPPSL1A6NEC2 478 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF839A8K0R7 811 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 CDC7O00311 574 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FFAR3O14843 346 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 HAT1O14929 419 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 GPR42O15529 346 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PHGDHO43175 533 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 SRPX2O60687 465 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 WISP2O76076 250 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 F10P00742 488 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 SERPINA7P05543 415 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 SAT1P21673 171 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FBLP22087 321 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 CMPK1P30085 196 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 STX2P32856 288 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 RPA3P35244 121 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 ARG2P78540 354 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 POU4F1Q01851 419 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 EEF1A2Q05639 463 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRDX1Q06830 199 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 NAB1Q13506 487 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 TSTA3Q13630 321 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PCOLCEQ15113 449 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FAM214AQ32MH5 1076 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 GLE1Q53GS7 698 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRMT9Q6P2P2 845 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FBXO42Q6P3S6 717 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 AGTRAPQ6RW13 159 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 BNC2Q6ZN30 1099 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 NDUFAF7Q7L592 441 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 KBTBD2Q8IY47 623 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PPM1NQ8N819 430 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 CEP112Q8N8E3 955 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 AMER3Q8N944 861 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR56A3Q8NH54 315 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 HAS2Q92819 552 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 MIEF2Q96C03 454 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FBXL8Q96CD0 374 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 MAGEB10Q96LZ2 347 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 CCDC138Q96M89 665 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR4K3Q96R72 315 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FUT8Q9BYC5 575 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 FAM129AQ9BZQ8 928 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 TRIM8Q9BZR9 551 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 MRPS30Q9NP92 439 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 ABI3Q9P2A4 366 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PTGFRNQ9P2B2 879 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF282Q9UDV7 671 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 ACANP16112 2415 aa7.5□□□□□ -1.21
CDC42BPA-210ENST00000462553 PHF3Q92576 2039 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-210ENST00000462553 NSG1A0A0A6YYJ2 146 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms