RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZXDCQ2QGD7 858 aaPredicted RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 ABHD13Q7L211 337 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 LGI4Q8N135 537 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 EID3Q8N140 333 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 C2CD4AQ8NCU7 369 aaPredicted RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 TBC1D20Q96BZ9 403 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 LINGO1Q96FE5 620 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 SIGLEC10Q96LC7 697 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 GPR137Q96N19 417 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 NAT9Q9BTE0 207 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 SGPP1Q9BX95 441 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 GPAMQ9HCL2 828 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 JRKLQ9Y4A0 524 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 ANKRD12Q6UB98 2062 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 OR2W5A6NFC9 320 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 URADA6NGE7 173 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 ZNF860A6NHJ4 632 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 NPIPA5E9PKD4 350 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 LCMT2O60294 686 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 FHP07954 510 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SNRPB2P08579 225 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 ABOP16442 354 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 ALOX12P18054 663 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 AGAP20933 346 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 GRNP28799 593 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 MAGEA3P43357 314 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 AP1S2P56377 157 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 MEF2AQ02078 507 aaPredicted RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 DHX9Q08211 1270 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 CSHL1Q14406 222 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 USP10Q14694 798 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 CRYMQ14894 314 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 C3AR1Q16581 482 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SPANXN3Q5MJ09 141 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SPINK14Q6IE38 97 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SLC25A25Q6KCM7 469 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 PAQR3Q6TCH7 311 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 MBOAT1Q6ZNC8 495 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 KIAA0408Q6ZU52 694 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 RPS19BP1Q86WX3 136 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 PDSS2Q86YH6 399 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 CYP4X1Q8N118 509 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 RASGEF1CQ8N431 466 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 NAT8LQ8N9F0 302 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 MDS2Q8NDY4 140 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 ARMC2Q8NEN0 867 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 TMEM125Q96AQ2 219 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SNF8Q96H20 258 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SIGLEC12Q96PQ1 595 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 PPANQ9NQ55 473 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 NPIPA1Q9UND3 350 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 PPP2R2CQ9Y2T4 447 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 SNRNP200O75643 2136 aaKnown RBP14.48□□□□□ -0.09
SKA3-204ENST00000462482 CCDC88CQ9P219 2028 aa14.48□□□□□ -0.09
SKA3-204ENST00000462482 TRBC2A0A5B9 178 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 PSMD12O00232 456 aaPredicted RBP14.47□□□□□ -0.09
SKA3-204ENST00000462482 NPPBP16860 134 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 FNTAP49354 379 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SLC26A5P58743 744 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SNRPNP63162 240 aaKnown RBP14.47□□□□□ -0.09
SKA3-204ENST00000462482 RHAGQ02094 409 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 MAPKAPK3Q16644 382 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 CYP1B1Q16678 543 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 DEFB134Q4QY38 66 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 GALNTL5Q7Z4T8 443 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SPPL2CQ8IUH8 684 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 LRRC8AQ8IWT6 810 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 GHDCQ8N2G8 530 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 AMER2Q8N7J2 671 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 ABHD11Q8NFV4 315 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SCMH1Q96GD3 660 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 PTCHD1Q96NR3 888 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 CDCP1Q9H5V8 836 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 CLK4Q9HAZ1 481 aaKnown RBP14.47□□□□□ -0.09
SKA3-204ENST00000462482 LRFN1Q9P244 771 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 ASIC3Q9UHC3 531 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 TINAGQ9UJW2 476 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 SH2B3Q9UQQ2 575 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 DYRK1BQ9Y463 629 aa14.47□□□□□ -0.09
SKA3-204ENST00000462482 ASPDHA6ND91 283 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 CHST10O43529 356 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 PRMT3O60678 531 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 GALR3O60755 368 aaPredicted RBP14.46□□□□□ -0.09
SKA3-204ENST00000462482 B4GALT2O60909 372 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 SP1P08047 785 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 ENO2P09104 434 aaPredicted RBP14.46□□□□□ -0.09
SKA3-204ENST00000462482 CYB561P49447 251 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 PHKG1Q16816 387 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 GPATCH11Q8N954 259 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 ZNF740Q8NDX6 193 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 OR5T3Q8NGG3 340 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 TSLPQ969D9 159 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 PYCR2Q96C36 320 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 SARGQ9BW04 601 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 HES7Q9BYE0 225 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 TSPAN10Q9H1Z9 355 aaPredicted RBP14.46□□□□□ -0.09
SKA3-204ENST00000462482 LANCL2Q9NS86 450 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms