RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZNF740Q8NDX6 193 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 OR51Q1Q8NH59 317 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 BRIX1Q8TDN6 353 aaKnown RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 METTL21AQ8WXB1 218 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 MOCOSQ96EN8 888 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 CNDP1Q96KN2 507 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 AIF1LQ9BQI0 150 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 VN1R1Q9GZP7 353 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 C19orf25Q9UFG5 118 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 SLC22A7Q9Y694 548 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 KCNE2Q9Y6J6 123 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
SF3A3-204ENST00000462258 RP1L1Q8IWN7 2480 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-204ENST00000462258 CLEC18AA5D8T8 446 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SERPINA7P05543 415 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CELA2AP08217 269 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 PRR35P0CG20 571 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CCDC166P0CW27 439 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CD1DP15813 335 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ALOX12P18054 663 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SPRP35270 261 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SOX11P35716 441 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 AHRP35869 848 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 MAGEA4P43358 317 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 RAB10P61026 200 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ATP6V0D1P61421 351 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SLC7A5Q01650 507 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 MFAP5Q13361 173 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 NAB1Q13506 487 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 PWP1Q13610 501 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 UBAP2LQ14157 1087 aaKnown RBP9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ZNF169Q14929 603 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-204ENST00000462258 EFTUD2Q15029 972 aaKnown RBP eCLIP9.61□□□□□ -0.875e-8■■■■■ 44.2
SF3A3-204ENST00000462258 WHAMMP3Q1A5X7 153 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 DEFB134Q4QY38 66 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CLEC18BQ6UXF7 455 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ISLR2Q6UXK2 745 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 RIPOR1Q6ZS17 1223 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 LANCL3Q6ZV70 420 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CYS1Q717R9 158 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ABHD13Q7L211 337 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 KLHDC8AQ8IYD2 350 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 TCAIMQ8N3R3 496 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SPATA6LQ8N4H0 392 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 AFAP1L2Q8N4X5 818 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ANKRD53Q8N9V6 530 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 CLEC18CQ8NCF0 446 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 OR5T3Q8NGG3 340 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 NT5CQ8TCD5 201 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 EXT2Q93063 718 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 RHBDF1Q96CC6 855 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SNRNP40Q96DI7 357 aaKnown RBP9.61□□□□□ -0.87
SF3A3-204ENST00000462258 PEX11GQ96HA9 241 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 TMEM79Q9BSE2 394 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 TUBB6Q9BUF5 446 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 ZNF700Q9H0M5 742 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 LRRC4CQ9HCJ2 640 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 WWOXQ9NZC7 414 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 PTGFRNQ9P2B2 879 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 SCN2AQ99250 2005 aa9.61□□□□□ -0.87
SF3A3-204ENST00000462258 IGHV3-20A0A0C4DH32 117 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CTAGE15A4D2H0 777 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 TCP11X1B4DZS4 312 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 GALR3O60755 368 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CDC123O75794 336 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 FAM155BO75949 473 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 URI1O94763 535 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SEC24DO94855 1032 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 ZNF888P0CJ79 500 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 GNAZP19086 355 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 GDF5P43026 501 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 AGTR2P50052 363 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 AP2B1P63010 937 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 OLR1P78380 273 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CDC16Q13042 620 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SLBPQ14493 270 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 OR4D1Q15615 310 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 C18orf21Q32NC0 220 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 GRTP1Q5TC63 336 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 B3GNTL1Q67FW5 361 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 NIPAL1Q6NVV3 410 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 RAPH1Q70E73 1250 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CMC1Q7Z7K0 106 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CTAGE6Q86UF2 777 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 CISD2Q8N5K1 135 aaKnown RBP9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SIRT6Q8N6T7 355 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 PDPRQ8NCN5 879 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 TRPV3Q8NET8 790 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 DNAJB14Q8TBM8 379 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 C19orf60Q96EN9 201 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 OR1F2PQ96R84 312 aa9.6□□□□□ -0.87
SF3A3-204ENST00000462258 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms