RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SOCS4Q8WXH5 440 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 HIST1H2AHQ96KK5 128 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 HIST1H2AJQ99878 128 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 H2AFJQ9BTM1 129 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 POFUT2Q9Y2G5 429 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 KLK4Q9Y5K2 254 aa17.77■□□□□ 0.43
HPS3-204ENST00000462030 PNMA8CA0A1B0GUJ8 204 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ANKRD34BA5PLL1 514 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 PRAMEF25A6NGN4 478 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 LOC110117498-PIK3R3F6TDL0 507 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 PCGF2P35227 344 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 SOX6P35712 828 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 SLC15A1P46059 708 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 HTR3AP46098 478 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 SLC11A1P49279 550 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 SELENOWP63302 87 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 CSTF3Q12996 717 aaKnown RBP17.76■□□□□ 0.43
HPS3-204ENST00000462030 ATP13A5Q4VNC0 1218 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ADNP2Q6IQ32 1131 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 GATAD2AQ86YP4 633 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 HOMEZQ8IX15 550 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ASB11Q8WXH4 323 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 NEDD4LQ96PU5 975 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 IMPAD1Q9NX62 359 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ZDHHC3Q9NYG2 299 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 VPS29Q9UBQ0 182 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 GABRR3A8MPY1 467 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 J3KTA2 159 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 SCAMP2O15127 329 aaKnown RBP17.76■□□□□ 0.43
HPS3-204ENST00000462030 ABCB1P08183 1280 aaPredicted RBP17.76■□□□□ 0.43
HPS3-204ENST00000462030 ANGPTL8Q6UXH0 198 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ZNF367Q7RTV3 350 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 NRARPQ7Z6K4 114 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ATCAYQ86WG3 371 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 UBQLNLQ8IYU4 475 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 DENND6BQ8NEG7 585 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 LILRB4Q8NHJ6 448 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 ALG14Q96F25 216 aa17.76■□□□□ 0.43
HPS3-204ENST00000462030 WBP11Q9Y2W2 641 aaKnown RBP17.76■□□□□ 0.43
HPS3-204ENST00000462030 AGAP14A8MT82 685 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 A8MV72 311 aaPredicted RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 CYP7B1O75881 506 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 MFN2O95140 757 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 KRT75O95678 551 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 PFN3P60673 137 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 OLR1P78380 273 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 DMC1Q14565 340 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 HKDC1Q2TB90 917 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 COX20Q5RI15 118 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ZNF852Q6ZMS4 543 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 OR8H2Q8N162 312 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 DEPDC4Q8N2C3 294 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 PIK3R3Q92569 461 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 CRELD1Q96HD1 420 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 CEP19Q96LK0 163 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 OR2A14Q96R47 310 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 MGLLQ99685 303 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 SLC30A2Q9BRI3 323 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 OR2B2Q9GZK3 357 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 GABRQQ9UN88 632 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 SERTM1A2A2V5 107 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ARHGAP33O14559 1287 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ETHE1O95571 254 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 C8GP07360 202 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 CKBP12277 381 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ANXA8P13928 327 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 IRF8Q02556 426 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ACSM2AQ08AH3 577 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 EIF4HQ15056 248 aaKnown RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 SSX1Q16384 188 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 MICAQ29983 383 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ACSM2BQ68CK6 577 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ZNF544Q6NX49 715 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 ZNF783Q6ZMS7 281 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 C11orf65Q8NCR3 313 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 KLF16Q9BXK1 252 aaPredicted RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 DDX28Q9NUL7 540 aaKnown RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 RUVBL1Q9Y265 456 aaKnown RBP17.75■□□□□ 0.43
HPS3-204ENST00000462030 CFL2Q9Y281 166 aa17.75■□□□□ 0.43
HPS3-204ENST00000462030 HOXC11O43248 304 aaPredicted RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 GPX5O75715 221 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 ETFAP13804 333 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 HMGA1P17096 107 aaKnown RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 TNFSF8P32971 234 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 HNMTP50135 292 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 DMPKQ09013 629 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 CDH18Q13634 790 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 CPTPQ5TA50 214 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 C19orf48Q6RUI8 117 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 NPAS3Q8IXF0 933 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 WDR20Q8TBZ3 569 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 GTPBP3Q969Y2 492 aaKnown RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 SPATA9Q9BWV2 254 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 GPATCH2Q9NW75 528 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 PLK4O00444 970 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 CRATP43155 626 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 DGKEP52429 567 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms