RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 A0A1B0GW55 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 A8MUA0 341 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 GPR89AB7ZAQ6 455 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX1O43812 170 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 GPR89BP0CG08 455 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L2P0CJ85 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L3P0CJ86 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L4P0CJ87 422 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L5P0CJ88 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L6P0CJ89 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4L7P0CJ90 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 RGRP47804 291 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 PGGT1BP53609 377 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 MTTPP55157 894 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
CHRD-208ENST00000460627 LSM3P62310 102 aaKnown RBP17.05■□□□□ 0.32
CHRD-208ENST00000460627 MYBPC1Q00872 1141 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 PPP1R3AQ16821 1122 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 RABL3Q5HYI8 236 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 SLC36A4Q6YBV0 504 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 TPSD1Q9BZJ3 242 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 LHX3Q9UBR4 397 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 DUX4Q9UBX2 424 aa17.05■□□□□ 0.32
CHRD-208ENST00000460627 XIRP1Q702N8 1843 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 BCAS2O75934 225 aaPredicted RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 LASP1Q14847 261 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 PTGR1Q14914 329 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 ZNF789Q5FWF6 425 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 C6orf89Q6UWU4 347 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 ATP6V1C2Q8NEY4 427 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 OR52B6Q8NGF0 335 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 RPRD1BQ9NQG5 326 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 TAS2R9Q9NYW1 312 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 DKK3Q9UBP4 350 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 IKZF2Q9UKS7 526 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 COL5A3P25940 1745 aaPredicted RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 EI24O14681 340 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 PRAMEF12O95522 483 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 H1F0P07305 194 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 POU2F1P14859 743 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 TIMP2P16035 220 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 DECR1Q16698 335 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 OR4K1Q8NGD4 311 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 PPP1R14AQ96A00 147 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 KLKB1P03952 638 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 GIMD1P0DJR0 217 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 MRPS21P82921 87 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 GALNT7Q86SF2 657 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 OR8J3Q8NGG0 315 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 TSACCQ96A04 125 aaPredicted RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 TMEM74Q96NL1 305 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 CTPS2Q9NRF8 586 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 FAM53CQ9NYF3 392 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 COMMD3-BMI1R4GMX3 469 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 ELOA3DA6NLF2 546 aaPredicted RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 WWP2O00308 870 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 TBX10O75333 385 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 HMGN1P05114 100 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 ELOA3BQ3SY89 546 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 RBM44Q6ZP01 1051 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 LGI4Q8N135 537 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 ELOA3Q8NG57 546 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 DGCR14Q96DF8 476 aaKnown RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 SLC22A12Q96S37 553 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
CHRD-208ENST00000460627 IGSF5Q9NSI5 407 aa17.04■□□□□ 0.32
CHRD-208ENST00000460627 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 A0A096LPI6 279 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 AURKAO14965 403 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 OPN1SWP03999 348 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 GSTM3P21266 225 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 CDKN1CP49918 316 aaPredicted RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 VSX2P58304 361 aaPredicted RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 SEMA3BQ13214 749 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 ENPP2Q13822 863 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 GRB7Q14451 532 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 HSD11B1LQ7Z5J1 315 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 ENKURQ8TC29 256 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 NODALQ96S42 347 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 PRAMEF26H0Y7S4 382 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 ARHGEF15O94989 841 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 SLC16A8O95907 504 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 DCTN2Q13561 401 aaKnown RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 ATG9BQ674R7 924 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 REEP3Q6NUK4 255 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 TEX26Q8N6G2 289 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 RPLP0P6Q8NHW5 317 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 IL21RQ9HBE5 538 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 DAPK2Q9UIK4 370 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 DNAJC15Q9Y5T4 150 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 TPST2O60704 377 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 SNNO75324 88 aaPredicted RBP17.03■□□□□ 0.32
CHRD-208ENST00000460627 LYNP07948 512 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 CD9P21926 228 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 CASRP41180 1078 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 CRB2Q5IJ48 1285 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 NFKBIDQ8NI38 313 aa17.03■□□□□ 0.32
CHRD-208ENST00000460627 NR4A3Q92570 626 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms