RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 BPIP17213 487 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 FAUP35544 74 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 MEF2AQ02078 507 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 TPRG1LQ5T0D9 272 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 FRRS1Q6ZNA5 592 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 PPP1R14AQ96A00 147 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 LRIG1Q96JA1 1093 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF354BQ96LW1 612 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ARNT2Q9HBZ2 717 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 USP3Q9Y6I4 520 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 MNDAP41218 407 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 E2F2Q14209 437 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 SUZ12Q15022 739 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 APCDD1Q8J025 514 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 RIPOR3Q96MK2 946 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 KCTD7Q96MP8 289 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 FARSBQ9NSD9 589 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 RBMX2Q9Y388 322 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 CITO14578 2027 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 LDB2O43679 373 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 C1GALT1C1LP0DN25 315 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 TSTQ16762 297 aaKnown RBP14.27□□□□□ -0.12
PTPRU-205ENST00000460170 TLDC1Q6P9B6 456 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 MEIOBQ8N635 442 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 ARMC5Q96C12 935 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 TUBA1CQ9BQE3 449 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 GINS4Q9BRT9 223 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 SP140LQ9H930 580 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 NEK6Q9HC98 313 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 RNF6Q9Y252 685 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 TIA1P31483 386 aaKnown RBP eCLIP14.27□□□□□ -0.123e-7■□□□□ 8.7
PTPRU-205ENST00000460170 HLCSP50747 726 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 IRAK1BP1Q5VVH5 260 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 RPTNQ6XPR3 784 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 CNTN4Q8IWV2 1026 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 TAS2R9Q9NYW1 312 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 PLAGL1Q9UM63 463 aa14.27□□□□□ -0.12
PTPRU-205ENST00000460170 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-205ENST00000460170 GDI1P31150 447 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 OR1E2P47887 323 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 GPR68Q15743 365 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF404Q494X3 552 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 OR10H5Q8NGA6 315 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 KCNK6Q9Y257 313 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-205ENST00000460170 WWP2O00308 870 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 TFPIP10646 304 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 CDKN1CP49918 316 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-205ENST00000460170 INHBCP55103 352 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 DOC2AQ14183 400 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 PEG10Q86TG7 708 aaKnown RBP14.27□□□□□ -0.13
PTPRU-205ENST00000460170 KLHL36Q8N4N3 616 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 MS4A4AQ96JQ5 239 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 BOCQ9BWV1 1114 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 PREBQ9HCU5 417 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 ACTL7AQ9Y615 435 aa14.27□□□□□ -0.13
PTPRU-205ENST00000460170 BTAF1O14981 1849 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 GM2AP17900 193 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPRU-205ENST00000460170 PCBP2Q15366 365 aaKnown RBP eCLIP14.26□□□□□ -0.138e-10■■■■□ 24.4
PTPRU-205ENST00000460170 SLC30A6Q6NXT4 461 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 FAM43BQ6ZT52 329 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-205ENST00000460170 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 C5orf34Q96MH7 638 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 ARMC1Q9NVT9 282 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 PCDHB11Q9Y5F2 797 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 STON1Q9Y6Q2 735 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 A0A0J9YVX5 310 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 BTN3A3O00478 584 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 STATHP02808 62 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 RAB8AP61006 207 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 RBBP4Q09028 425 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 ADNP2Q6IQ32 1131 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 OR56A1Q8NGH5 318 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 CNIH3Q8TBE1 160 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 CD200R1Q8TD46 325 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 SIPA1Q96FS4 1042 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 A6NHS1 94 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 TEX28O15482 410 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 CAPN5O15484 640 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-205ENST00000460170 TLX2O43763 284 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-205ENST00000460170 SOX14O95416 240 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 GRK6P43250 576 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 BTN3A2P78410 334 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 ACVR1CQ8NER5 493 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 RAB8BQ92930 207 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 DOHHQ9BU89 302 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 C20orf27Q9GZN8 174 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 FBXL12Q9NXK8 326 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 MALT1Q9UDY8 824 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 FAM170BA6NMN3 283 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 DRGXA6NNA5 263 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 DNAJB5O75953 348 aa14.26□□□□□ -0.13
PTPRU-205ENST00000460170 GGT1P19440 569 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms