RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 MPP1Q00013 466 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 PMP22Q01453 160 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 RHAGQ02094 409 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 NAE1Q13564 534 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 PWP1Q13610 501 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 FCRLBQ6BAA4 426 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 MYO1HQ8N1T3 1032 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
CPNE1-220ENST00000458038 ABHD11Q8NFV4 315 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 ZCCHC10Q8TBK6 192 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 SIGLEC10Q96LC7 697 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 NAP1L3Q99457 506 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-220ENST00000458038 MACROD1Q9BQ69 325 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 CLK4Q9HAZ1 481 aaKnown RBP20.26■□□□□ 0.83
CPNE1-220ENST00000458038 SH3BGRL2Q9UJC5 107 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 CELSR1Q9NYQ6 3014 aa20.26■□□□□ 0.83
CPNE1-220ENST00000458038 PABPN1LA6NDY0 278 aaKnown RBP20.25■□□□□ 0.83
CPNE1-220ENST00000458038 GOLGA8MH3BSY2 632 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 NPPBP16860 134 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 COILP38432 576 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-220ENST00000458038 CCR8P51685 355 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 USP10Q14694 798 aaKnown RBP20.25■□□□□ 0.83
CPNE1-220ENST00000458038 C3AR1Q16581 482 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 HSP90AA5PQ58FG0 334 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 DUPD1Q68J44 220 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 TTC27Q6P3X3 843 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 STRA8Q7Z7C7 330 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 PDSS2Q86YH6 399 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 EID3Q8N140 333 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 AFAP1L2Q8N4X5 818 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 C2CD4AQ8NCU7 369 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-220ENST00000458038 OR4K1Q8NGD4 311 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 TBC1D20Q96BZ9 403 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 ATG10Q9H0Y0 220 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 KLHL1Q9NR64 748 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 LANCL2Q9NS86 450 aa20.25■□□□□ 0.83
CPNE1-220ENST00000458038 ANKRD17O75179 2603 aaKnown RBP20.25■□□□□ 0.83
CPNE1-220ENST00000458038 OR2W5A6NFC9 320 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 GABRR3A8MPY1 467 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 FAM227AF5H4B4 570 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 FHP07954 510 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 SP1P08047 785 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 CDH1P12830 882 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 AP1S2P56377 157 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 OR4D2P58180 307 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 SLC26A5P58743 744 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 ADORA2A-AS1P86434 159 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 OC90Q02509 493 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-220ENST00000458038 CYP1B1Q16678 543 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 SPINK14Q6IE38 97 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 SLC25A25Q6KCM7 469 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 CCDC137Q6PK04 289 aaKnown RBP20.24■□□□□ 0.83
CPNE1-220ENST00000458038 RASGEF1CQ8N431 466 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 AMER2Q8N7J2 671 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 NAT8LQ8N9F0 302 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 ADAMTS18Q8TE60 1221 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 PEX11GQ96HA9 241 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 PBKQ96KB5 322 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 FRMD6Q96NE9 622 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 NPAS2Q99743 824 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 TRIM54Q9BYV2 358 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 IARS2Q9NSE4 1012 aaKnown RBP20.24■□□□□ 0.83
CPNE1-220ENST00000458038 ADAMTS6Q9UKP5 1117 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 SH2B3Q9UQQ2 575 aa20.24■□□□□ 0.83
CPNE1-220ENST00000458038 CSMD2Q7Z408 3487 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 C2CD3Q4AC94 2353 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 TRBC2A0A5B9 178 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 NDC80O14777 642 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 ASNA1O43681 348 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 GALR3O60755 368 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-220ENST00000458038 TTC4O95801 387 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 F7P08709 466 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-220ENST00000458038 ALOX12P18054 663 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 SRSF11Q05519 484 aaKnown RBP20.23■□□□□ 0.83
CPNE1-220ENST00000458038 KIAA0408Q6ZU52 694 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 RPS19BP1Q86WX3 136 aaKnown RBP20.23■□□□□ 0.83
CPNE1-220ENST00000458038 PPIL6Q8IXY8 311 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 GHDCQ8N2G8 530 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 ELP5Q8TE02 316 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 GRK7Q8WTQ7 553 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 ATL1Q8WXF7 558 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 ALKBH8Q96BT7 664 aaKnown RBP20.23■□□□□ 0.83
CPNE1-220ENST00000458038 LURAP1Q96LR2 239 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 NAT9Q9BTE0 207 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 LRFN1Q9P244 771 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 TINAGQ9UJW2 476 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 MEMO1Q9Y316 297 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 NEU2Q9Y3R4 380 aa20.23■□□□□ 0.83
CPNE1-220ENST00000458038 URADA6NGE7 173 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 NPIPA5E9PKD4 350 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 OR1F1O43749 312 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 CLDN14O95500 239 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 PGAM1P18669 254 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 SSTR2P30874 369 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 IL2P60568 153 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 TIAL1Q01085 375 aaKnown RBP eCLIP20.22■□□□□ 0.83
CPNE1-220ENST00000458038 RGS1Q08116 209 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 DHX9Q08211 1270 aaKnown RBP20.22■□□□□ 0.83
CPNE1-220ENST00000458038 PAQR3Q6TCH7 311 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 ABHD13Q7L211 337 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms