RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 C8GP07360 202 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SP1P08047 785 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ZSCAN5DPP0CG00 497 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 MLNP12872 115 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ZNF24P17028 368 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 IL1RNP18510 177 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 CYB561P49447 251 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 RGS4P49798 205 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 PMP22Q01453 160 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SP140Q13342 867 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 DHX34Q14147 1143 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 KCNJ11Q14654 390 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 USP10Q14694 798 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SFT2D3Q587I9 215 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ZNF470Q6ECI4 717 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 TMEM211Q6ICI0 200 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SLC25A25Q6KCM7 469 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SPNS3Q6ZMD2 512 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 LANCL3Q6ZV70 420 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 UBE2R2Q712K3 238 aaPredicted RBP7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 CENPUQ71F23 418 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ASPGQ86U10 573 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 CDH24Q86UP0 819 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 C17orf64Q86WR6 236 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ZNF295-AS1Q8N0V1 137 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 PRELID2Q8N945 189 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 PPFIBP2Q8ND30 876 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ADAMTS18Q8TE60 1221 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SLC13A3Q8WWT9 602 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 SIGLEC12Q96PQ1 595 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 HAUS8Q9BT25 410 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 MCCC2Q9HCC0 563 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 XAB2Q9HCS7 855 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ABCF3Q9NUQ8 709 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 HCN3Q9P1Z3 774 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 LRFN1Q9P244 771 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 ITGB1BP2Q9UKP3 347 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 KLF13Q9Y2Y9 288 aaPredicted RBP7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 DHRS7Q9Y394 339 aa7.55□□□□□ -1.2
NIF3L1-209ENST00000454952 IGHV3-20A0A0C4DH32 117 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SYNDIG1LA6NDD5 238 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 URADA6NGE7 173 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SDR42E2A6NKP2 422 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 GOLGA8KD6RF30 607 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 GOLGA8TH3BQL2 631 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SGK494L7N484 410 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 NDC80O14777 642 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SLC16A5O15375 505 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 NME2P1O60361 137 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 HIST1H2AGP0C0S8 130 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 CD1EP15812 388 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 HIST1H2ADP20671 130 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 NME2P22392 152 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 IMPA1P29218 277 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 MAGEA6P43360 314 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 CCR8P51685 355 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 OR4D2P58180 307 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SLC26A5P58743 744 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TBPL1P62380 186 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 CSNK1G2P78368 415 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 RHAGQ02094 409 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TLE4Q04727 773 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PWP1Q13610 501 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 MAPKAPK3Q16644 382 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 FCRLBQ6BAA4 426 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SPINK14Q6IE38 97 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 CAPN13Q6MZZ7 669 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 CES3Q6UWW8 571 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 ABHD13Q7L211 337 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 GALNTL5Q7Z4T8 443 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 VN1R4Q7Z5H5 301 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 STRA8Q7Z7C7 330 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PRUNE1Q86TP1 453 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 RPS19BP1Q86WX3 136 aaKnown RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PLD3Q8IV08 490 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SIAH3Q8IW03 269 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 LRRC56Q8IYG6 542 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 MFSD9Q8NBP5 474 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 AGAP11Q8TF27 550 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 ASB5Q8WWX0 329 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TBC1D20Q96BZ9 403 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TM4SF19Q96DZ7 209 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 HIST1H2AHQ96KK5 128 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 HIST1H2AJQ99878 128 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TRIM51Q9BSJ1 452 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 DESI2Q9BSY9 194 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 FAM167BQ9BTA0 163 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 H2AFJQ9BTM1 129 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 ENKD1Q9H0I2 346 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TRIM45Q9H8W5 580 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 SYNPO2LQ9H987 977 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PARVBQ9HBI1 364 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 ANKRD10Q9NXR5 420 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 TRMT6Q9UJA5 497 aaKnown RBP7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 PPT2Q9UMR5 302 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 GUCA1BQ9UMX6 200 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 NAALAD2Q9Y3Q0 740 aa7.54□□□□□ -1.2
NIF3L1-209ENST00000454952 INTS1Q8N201 2190 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms