RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RASGRP1O95267 797 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 PRKACGP22612 351 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 CXCR2P25025 360 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 AK4P27144 223 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 MAPK12P53778 367 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 MMP21Q8N119 569 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 TMEM145Q8NBT3 493 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 TEX101Q9BY14 249 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 ING2Q9H160 280 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 G3V2T6 193 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 HS6ST1O60243 411 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 ADAM23O75077 832 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 NUDT7P0C024 238 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 LRIF1Q5T3J3 769 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 C16orf78Q8WTQ4 265 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 FGF22Q9HCT0 170 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 FAM220BPB1ANY3 271 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 ACSL1P33121 698 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ZNF33BQ06732 778 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 NKG7Q16617 165 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 KIAA1161Q6NSJ0 714 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 LCTLQ6UWM7 567 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 REXO5Q96IC2 774 aaKnown RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 MYRFQ9Y2G1 1151 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 EYSQ5T1H1 3165 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 MAP3K13O43283 966 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 CDH15P55291 814 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 HTR4Q13639 388 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 SPDYE7PQ495Y7 208 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ZNF658BQ4V348 819 aaPredicted RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 TBPL2Q6SJ96 375 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 GORASP2Q9H8Y8 452 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ENO4A6NNW6 628 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 OPN1SWP03999 348 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 CEACAM5P06731 702 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ETS2P15036 469 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 GRK3P35626 688 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ACTR1BP42025 376 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 WNT3P56703 355 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ACTR1AP61163 376 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ZNF385BQ569K4 471 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 R3HCC1LQ7Z5L2 792 aaKnown RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 VTCN1Q7Z7D3 282 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 ZDHHC21Q8IVQ6 265 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 EXOSC8Q96B26 276 aaKnown RBP13.1□□□□□ -0.31
CLK3-203ENST00000454830 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
CLK3-203ENST00000454830 RASAL1O95294 804 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 CLCA4Q14CN2 919 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 VMACQ2NL98 169 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 ZC3H7AQ8IWR0 971 aaKnown RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 ADHFE1Q8IWW8 467 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 EID3Q8N140 333 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TSPAN14Q8NG11 270 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 OR4E2Q8NGC2 313 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 OR8J2Q8NGG1 315 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 SPPL2AQ8TCT8 520 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 GDF15Q99988 308 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 SLC35A5Q9BS91 424 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TMEM121BQ9BXQ6 578 aaPredicted RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 SSR2P43308 183 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 CHERPQ8IWX8 916 aaKnown RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 PNPLA3Q9NST1 481 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 DNAJB9Q9UBS3 223 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 PADI4Q9UM07 663 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 ORC6Q9Y5N6 252 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 A0A1W2PRB8 838 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 PLRG1O43660 514 aaKnown RBP13.09□□□□□ -0.31
CLK3-203ENST00000454830 OR6B1O95007 311 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 HTR1BP28222 390 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TRIM23P36406 574 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 HBA1P69905 142 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TFF2Q03403 129 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 MTAPQ13126 283 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 GAB1Q13480 694 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 XKR5Q6UX68 686 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 TDHQ8IZJ6 230 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 PYURFQ96I23 114 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 CCDC115Q96NT0 180 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
CLK3-203ENST00000454830 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms