RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ZNF740Q8NDX6 193 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 TRPV3Q8NET8 790 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 NT5CQ8TCD5 201 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 FBXO25Q8TCJ0 367 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 BRIX1Q8TDN6 353 aaKnown RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 ANKRD49Q8WVL7 239 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 C19orf60Q96EN9 201 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CYTH2Q99418 400 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 GPR22Q99680 433 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 RBBP8Q99708 897 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 MCMBPQ9BTE3 642 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 ZNF700Q9H0M5 742 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CAB39LQ9H9S4 337 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 AGPAT4Q9NRZ5 378 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 ASF1BQ9NVP2 202 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 PTGFRNQ9P2B2 879 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 BSNQ9UPA5 3926 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CNTRLQ7Z7A1 2325 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 SCN3AQ9NY46 2000 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ZNF860A6NHJ4 632 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 NCF1BA6NI72 391 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 NCF1CA8MVU1 366 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 TCP11X1B4DZS4 312 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 PHGDHO43175 533 aaKnown RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 GALR3O60755 368 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 AGFG2O95081 481 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 NCF1P14598 390 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ALOX12P18054 663 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 GNAZP19086 355 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 GPX6P59796 221 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ATP6V0D1P61421 351 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ARG2P78540 354 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 CDC16Q13042 620 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 NAB1Q13506 487 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ELOAQ14241 798 aaKnown RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 ZNF169Q14929 603 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 TGFBIQ15582 683 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 KBTBD12Q3ZCT8 623 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 DEFB134Q4QY38 66 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 GRTP1Q5TC63 336 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 B3GNTL1Q67FW5 361 aaPredicted RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 C8orf74Q6P047 294 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 PDSS2Q86YH6 399 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 GPSM1Q86YR5 675 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 AFAP1L2Q8N4X5 818 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 SIRT6Q8N6T7 355 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 PPM1NQ8N819 430 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 RHBDF1Q96CC6 855 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 MOCOSQ96EN8 888 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 PEX11GQ96HA9 241 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 OR1F2PQ96R84 312 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 CAPS2Q9BXY5 557 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 UNKQ9C0B0 810 aaKnown RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 CNOT10Q9H9A5 744 aaKnown RBP10.09□□□□□ -0.79
DDX39A-203ENST00000454233 WWOXQ9NZC7 414 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 CSAG2Q9Y5P2 127 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 SHANK1Q9Y566 2161 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 DOPEY2Q9Y3R5 2298 aa10.09□□□□□ -0.79
DDX39A-203ENST00000454233 SETXQ7Z333 2677 aaKnown RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SEC24DO94855 1032 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 S100BP04271 92 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 ZNF888P0CJ79 500 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 C1GALT1C1LP0DN25 315 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 JAK1P23458 1154 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SOX11P35716 441 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 GDF5P43026 501 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 TSFMP43897 325 aaKnown RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 RAB10P61026 200 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.81e-6■■□□□ 12.1
DDX39A-203ENST00000454233 ACTN3Q08043 901 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 MRPL49Q13405 166 aaKnown RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SLMAPQ14BN4 828 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 NR6A1Q15406 480 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 BTBD16Q32M84 506 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 CDKL4Q5MAI5 379 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 ABHD17BQ5VST6 288 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SULT1C3Q6IMI6 304 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 ZDHHC24Q6UX98 284 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 LANCL3Q6ZV70 420 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 ANKRD37Q7Z713 158 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 KLHDC8AQ8IYD2 350 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 KRT78Q8N1N4 520 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SPATA6LQ8N4H0 392 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 ANKRD53Q8N9V6 530 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 TTLQ8NG68 377 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 OR5T3Q8NGG3 340 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 PSMF1Q92530 271 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 IMMP1LQ96LU5 166 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 RBCK1Q9BYM8 510 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 SPNS1Q9H2V7 528 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 CLK4Q9HAZ1 481 aaKnown RBP10.08□□□□□ -0.8
DDX39A-203ENST00000454233 LRRC4CQ9HCJ2 640 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 DNAJC11Q9NVH1 559 aa10.08□□□□□ -0.8
DDX39A-203ENST00000454233 GPRC5BQ9NZH0 403 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms