RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PSMG3-AS1Q96PY0 264 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 GPR22Q99680 433 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 HCN3Q9P1Z3 774 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 SLC22A14Q9Y267 594 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 NTNG1Q9Y2I2 539 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
USP40-207ENST00000450940 NAALAD2Q9Y3Q0 740 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 KCNE2Q9Y6J6 123 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 NDUFS4O43181 175 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 GALR3O60755 368 aaPredicted RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 RDH16O75452 317 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 SLC6A12P48065 614 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 SLC12A2P55011 1212 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 ZNF169Q14929 603 aaPredicted RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 TLR1Q15399 786 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 CDKL4Q5MAI5 379 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 FHL5Q5TD97 284 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 NIPAL1Q6NVV3 410 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 RPUSD3Q6P087 351 aaKnown RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 ZDHHC24Q6UX98 284 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 LINC00696Q6ZRV3 163 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 CPEB2Q7Z5Q1 589 aaKnown RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 BRIX1Q8TDN6 353 aaKnown RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 METTL21AQ8WXB1 218 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 RHBDF1Q96CC6 855 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 TSPAN17Q96FV3 270 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 TSNARE1Q96NA8 513 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 OR1F2PQ96R84 312 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 RBBP8Q99708 897 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 AIF1LQ9BQI0 150 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 RAB17Q9H0T7 212 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 CLK4Q9HAZ1 481 aaKnown RBP18.31■□□□□ 0.52
USP40-207ENST00000450940 DYRK1BQ9Y463 629 aa18.31■□□□□ 0.52
USP40-207ENST00000450940 SPTAN1Q13813 2472 aaKnown RBP18.3■□□□□ 0.52
USP40-207ENST00000450940 CELA2AP08217 269 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 SMIM10L1P0DMW3 83 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 ALOX12P18054 663 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 GGT5P36269 586 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 GP5P40197 560 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 GLRBP48167 497 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 PLTPP55058 493 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 GUCY2DQ02846 1103 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 HYAL2Q12891 473 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 MRPL49Q13405 166 aaKnown RBP18.3■□□□□ 0.52
USP40-207ENST00000450940 TRADDQ15628 312 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 ZKSCAN8Q15776 578 aaPredicted RBP18.3■□□□□ 0.52
USP40-207ENST00000450940 ANKRD53Q8N9V6 530 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 PLPP5Q8NEB5 264 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 TRPV3Q8NET8 790 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 FBXO25Q8TCJ0 367 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 HAS2Q92819 552 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 SMIM10Q96HG1 83 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 UBXN10Q96LJ8 280 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 EGFL8Q99944 293 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 SLC6A16Q9GZN6 736 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 CAB39LQ9H9S4 337 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 LANCL2Q9NS86 450 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 PTGFRNQ9P2B2 879 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 MAP10Q9P2G4 905 aa18.3■□□□□ 0.52
USP40-207ENST00000450940 POLEQ07864 2286 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 CTAGE15A4D2H0 777 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 ITGAMP11215 1152 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 MAGEA4P43358 317 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 AGTR2P50052 363 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 SKP1P63208 163 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 RHAGQ02094 409 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 RGS1Q08116 209 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 USP10Q14694 798 aaKnown RBP18.29■□□□□ 0.52
USP40-207ENST00000450940 NR6A1Q15406 480 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 TGFBIQ15582 683 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 MINDY4Q4G0A6 757 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 PLAG1Q6DJT9 500 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 LANCL3Q6ZV70 420 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 ANKRD37Q7Z713 158 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 CTAGE6Q86UF2 777 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 CATSPER1Q8NEC5 780 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 UTP15Q8TED0 518 aaKnown RBP18.29■□□□□ 0.52
USP40-207ENST00000450940 CREB3L4Q8TEY5 395 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 RNF32Q9H0A6 362 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 COPG2Q9UBF2 871 aa18.29■□□□□ 0.52
USP40-207ENST00000450940 C19orf25Q9UFG5 118 aaPredicted RBP18.29■□□□□ 0.52
USP40-207ENST00000450940 OR2W5A6NFC9 320 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 CYSRT1A8MQ03 144 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 WFS1O76024 890 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 CCDC166P0CW27 439 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 C1GALT1C1LP0DN25 315 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 CD1DP15813 335 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 STMN1P16949 149 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 GNAZP19086 355 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 TNFSF10P50591 281 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 ATP6V0D1P61421 351 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 EIF2S3LQ2VIR3 472 aaKnown RBP18.28■□□□□ 0.52
USP40-207ENST00000450940 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 DEFB134Q4QY38 66 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 GRTP1Q5TC63 336 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 H3F3CQ6NXT2 135 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 SLCO4C1Q6ZQN7 724 aa18.28■□□□□ 0.52
USP40-207ENST00000450940 FRA10AC1Q70Z53 315 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms