RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PRAMEF11O60813 436 aa13.46□□□□□ -0.26
VPS52-212ENST00000445902 AP2A2O94973 939 aa13.46□□□□□ -0.26
VPS52-212ENST00000445902 MYCP01106 439 aaPredicted RBP13.46□□□□□ -0.26
VPS52-212ENST00000445902 ALPPP05187 535 aa13.46□□□□□ -0.26
VPS52-212ENST00000445902 FEN1P39748 380 aaKnown RBP13.46□□□□□ -0.26
VPS52-212ENST00000445902 UBE3AQ05086 875 aa13.46□□□□□ -0.26
VPS52-212ENST00000445902 HNRNPA0Q13151 305 aaKnown RBP13.46□□□□□ -0.26
VPS52-212ENST00000445902 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 A8MUA0 341 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 MAGEB17A8MXT2 336 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 LRRTM2O43300 516 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 PRLP01236 227 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 EPOP01588 193 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 ODC1P11926 461 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 EPB42P16452 691 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 GPR19Q15760 415 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 ESCO2Q56NI9 601 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 LAMTOR1Q6IAA8 161 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 CCDC149Q6ZUS6 474 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 PTCHD4Q6ZW05 846 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 METTL23Q86XA0 190 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 BBS7Q8IWZ6 715 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 OR8H1Q8NGG4 311 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 NACC2Q96BF6 587 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 MCUBQ9NWR8 336 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 DHRS7Q9Y394 339 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 FAM227AF5H4B4 570 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 TNFRSF10BO14763 440 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 PLD2O14939 933 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 MAPK12P53778 367 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 GANABQ14697 944 aaKnown RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 LARS2Q15031 903 aaKnown RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 LIPKQ5VXJ0 399 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 PAQR6Q6TCH4 344 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 OR4M2Q8NGB6 313 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 LRRC20Q8TCA0 184 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 COPS8Q99627 209 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 ACBD6Q9BR61 282 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 TAPBPLQ9BX59 468 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 C11orf16Q9NQ32 467 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 NDUFAF4Q9P032 175 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 RHCGQ9UBD6 479 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
VPS52-212ENST00000445902 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
VPS52-212ENST00000445902 SMIM35A0A1B0GVV1 85 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 NFKBIEO00221 500 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 YY2O15391 372 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 SNAI1O95863 264 aaPredicted RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 SRCP12931 536 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 CAV3P56539 151 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PTGES3Q15185 160 aaKnown RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 DUOXA1Q1HG43 343 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.44□□□□□ -0.26
VPS52-212ENST00000445902 IDO2Q6ZQW0 420 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 ATP6V1C2Q8NEY4 427 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 SLC39A13Q96H72 371 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 ELOVL6Q9H5J4 265 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 NLKQ9UBE8 527 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PCDH17O14917 1159 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 CCNB2O95067 398 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PRAMEF12O95522 483 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 HLA-EP13747 358 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 ALAS2P22557 587 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 RPS3P23396 243 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS52-212ENST00000445902 EIF4HQ15056 248 aaKnown RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 GLYR1Q49A26 553 aaPredicted RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 C19orf48Q6RUI8 117 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 ZNF598Q86UK7 904 aaKnown RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 TIGD4Q8IY51 512 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 C12orf4Q9NQ89 552 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 FZD4Q9ULV1 537 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PRSS21Q9Y6M0 314 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 A0A0G2JLL6 359 aaPredicted RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 SLC25A14O95258 325 aaPredicted RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
VPS52-212ENST00000445902 GRK4P32298 578 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 EVI2BP34910 448 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 CNR2P34972 360 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PTGS2P35354 604 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 MAN2A2P49641 1150 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 PRIM2P49643 509 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 CYP4F8P98187 520 aa13.44□□□□□ -0.26
VPS52-212ENST00000445902 UPP1Q16831 310 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms