RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 CDK6Q00534 326 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 MC1RQ01726 317 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 C10orf62Q5T681 223 aaPredicted RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 DESI1Q6ICB0 168 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 FAM131AQ6UXB0 335 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 MACC1Q6ZN28 852 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 C2orf15Q8WU43 125 aaKnown RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 XAGE5Q8WWM1 108 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 LINC01599Q8WXQ3 324 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 RAB8BQ92930 207 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 C1GALT1C1Q96EU7 318 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 CEP295NLQ96MC4 621 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 GIMAP4Q9NUV9 329 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 MARCH5Q9NX47 278 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 CENPXA8MT69 81 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 FADS2P1A8MWK0 482 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 J3KTA2 159 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 INPPL1O15357 1258 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 KIAA0513O60268 411 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 RFPL2O75678 378 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 POP4O95707 220 aaKnown RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 ITGAMP11215 1152 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 CYP2A6P11509 494 aaPredicted RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 TAS2R50P59544 299 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 MBTPS1Q14703 1052 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 TEAD4Q15561 434 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 CHST14Q8NCH0 376 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 ST13P5Q8NFI4 369 aaPredicted RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 RHOXF1Q8NHV9 184 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 SORCS1Q8WY21 1168 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 NACC2Q96BF6 587 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 AP2M1Q96CW1 435 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 OTUB1Q96FW1 271 aaPredicted RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 COL21A1Q96P44 957 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
MSH6-204ENST00000445503 TMEM45AQ9NWC5 275 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 TVP23BQ9NYZ1 205 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 ZNF221Q9UK13 617 aa11.45□□□□□ -0.58
MSH6-204ENST00000445503 TSPAN6O43657 245 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 PEX14O75381 377 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 RCVRNP35243 200 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 GSTM5P46439 218 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 IQCCQ4KMZ1 466 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ADNP2Q6IQ32 1131 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 KRT73Q86Y46 540 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 EXOSC8Q96B26 276 aaKnown RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 ALOXE3Q9BYJ1 711 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CLEC4EQ9ULY5 219 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ASF1AQ9Y294 204 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 MYO10Q9HD67 2058 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 MIA3Q5JRA6 1907 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 TRAV19A0A0A6YYK7 116 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 A0A1W2PRB8 838 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 GABRR3A8MPY1 467 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 H3BNC9 293 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 TMEM189-UBE2V1I3L0A0 370 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZW10O43264 779 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 SGTAO43765 313 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 TSC22D2O75157 780 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ELFN1P0C7U0 828 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 JUPP14923 745 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 RPS3P23396 243 aaKnown RBP eCLIP11.44□□□□□ -0.585e-7■■■□□ 16.7
MSH6-204ENST00000445503 SLC15A1P46059 708 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 PTPN5P54829 565 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 TUBA1BP68363 451 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 KEAP1Q14145 624 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 NCF4Q15080 339 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 UGT8Q16880 541 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 PYDC2Q56P42 97 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CAPN13Q6MZZ7 669 aaPredicted RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 TMPRSS11AQ6ZMR5 421 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 TUBA1AQ71U36 451 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CCM2Q9BSQ5 444 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 POLR2J2Q9GZM3 115 aaKnown RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZNF646O15015 1829 aaPredicted RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 STATHP02808 62 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CBSLP0DN79 551 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 PABPC1P11940 636 aaKnown RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 AOAHP28039 575 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CBSP35520 551 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZFP69Q49AA0 526 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 CST9Q5W186 159 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 RAET1GQ6H3X3 334 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 PJA1Q8NG27 643 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 HUS1BQ8NHY5 278 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 REPS1Q96D71 796 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 MGLLQ99685 303 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 SLC12A9Q9BXP2 914 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 BEX2Q9BXY8 128 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 OSGEPL1Q9H4B0 414 aa11.44□□□□□ -0.58
MSH6-204ENST00000445503 HMX1Q9NP08 348 aaPredicted RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 ZNF282Q9UDV7 671 aaPredicted RBP11.44□□□□□ -0.58
MSH6-204ENST00000445503 ITGB1BP2Q9UKP3 347 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms