RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ATP5C1P36542 298 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 POLR2IP36954 125 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 NNMTP40261 264 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 KCNJ3P48549 501 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 XKP51811 444 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMSP52788 366 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PSMC5P62195 406 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPR50Q13585 617 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MXD4Q14582 209 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 DDR2Q16832 855 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PFKFB4Q16877 469 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AP5B1Q2VPB7 878 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AARDQ4LEZ3 155 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PKDCCQ504Y2 493 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AGKQ53H12 422 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AVPI1Q5T686 147 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 INTS11Q5TA45 600 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 N4BP2L1Q5TBK1 243 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 MLIPQ5VWP3 458 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BICRALQ6AI39 1079 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FUT10Q6P4F1 479 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PRSS55Q6UWB4 352 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SCIMPQ6UWF3 145 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GLB1LQ6UWU2 654 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RTL4Q6ZR62 310 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LRRC55Q6ZSA7 311 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TPRG1Q6ZUI0 275 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DENND6AQ8IWF6 608 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TCTE3Q8IZS6 198 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MEIOBQ8N635 442 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RTL3Q8N8U3 475 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 OR5T3Q8NGG3 340 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF606Q8WXB4 792 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RPL3LQ92901 407 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 HDAC10Q969S8 669 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TMEM143Q96AN5 459 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LRRC46Q96FV0 321 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MYO19Q96H55 970 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PPP3R2Q96LZ3 170 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RNF145Q96MT1 663 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AGPAT1Q99943 283 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CMSS1Q9BQ75 279 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CHCHD6Q9BRQ6 235 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LXNQ9BS40 222 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZPBPQ9BS86 351 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SPRTNQ9H040 489 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMG9Q9H0W8 520 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 DNTTIP1Q9H147 329 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ARRDC1-AS1Q9H2J1 176 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ANKRD19PQ9H560 264 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TBC1D17Q9HA65 648 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RC3H2Q9HBD1 1191 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 KLHL11Q9NVR0 708 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COA4Q9NYJ1 87 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TAS2R14Q9NYV8 317 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CCDC167Q9P0B6 97 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EXTL2Q9UBQ6 330 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FEM1BQ9UK73 627 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PADI3Q9ULW8 664 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 WASF3Q9UPY6 502 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TLR6Q9Y2C9 796 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PLEKHA6Q9Y2H5 1048 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 YARS2Q9Y2Z4 477 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SIT1Q9Y3P8 196 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 AKAP11Q9UKA4 1901 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CNTNAP2Q9UHC6 1331 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SPAARA0A1B0GVQ0 90 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PMS2P1A4D2B8 440 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BTBD17A6NE02 478 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MYMKA6NI61 221 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 WASHC1A8K0Z3 465 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 C2CD4DB7Z1M9 353 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MEIS1O00470 390 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FSCN2O14926 492 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC7A4O43246 635 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PCDHGA12O60330 932 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GLRA3O75311 464 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CNMDO75829 334 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RAF1P04049 648 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DNTTP04053 509 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 HRGP04196 525 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 STSP08842 583 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 STAG3L1P0CL83 205 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 COX5BP10606 129 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 IRF1P10914 325 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MLNP12872 115 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ETS1P14921 441 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF14P17017 642 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 ERCC2P18074 760 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ICAM3P32942 547 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPX4P36969 197 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 DPP6P42658 865 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC1A3P43003 542 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ETV4P43268 484 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GCLMP48507 274 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CCR9P51686 369 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SNRPEP62304 92 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 MAT1AQ00266 395 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 MC2RQ01718 297 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TNFRSF17Q02223 184 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms